Pakket: r-bioc-rgsepd (1.34.0-1)

[ Bron: r-bioc-rgsepd  ]

GNU R gene set enrichment / projection displays

R/GSEPD is a bioinformatics package for R to help disambiguate transcriptome samples (a matrix of RNA-Seq counts at transcript IDs) by automating differential expression (with DESeq2), then gene set enrichment (with GOSeq), and finally a N-dimensional projection to quantify in which ways each sample is like either treatment group.

Andere aan r-bioc-rgsepd gerelateerde pakketten

• dep: r-api-4.0

  virtueel pakket geboden door r-base-core

• dep: r-api-bioc-3.18

  virtueel pakket geboden door r-bioc-biocgenerics

• dep: r-bioc-annotationdbi

  GNU R Annotation Database Interface for BioConductor

• dep: r-bioc-biomart

  GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)

• dep: r-bioc-deseq2

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• dep: r-bioc-go.db

  annotation maps describing the entire Gene Ontology

• dep: r-bioc-goseq (>= 1.28)

  GNU R gene ontology analyser for RNA-seq and other length biased data

• dep: r-bioc-org.hs.eg.db

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• dep: r-bioc-summarizedexperiment

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• dep: r-cran-gplots

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• sug: r-bioc-biocgenerics

  generic functions for Bioconductor

• sug: r-cran-boot

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• sug: r-cran-knitr

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• sug: r-cran-xtable

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Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
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