Pakket: r-bioc-oligo (1.66.0+ds-1)

[ Bron: r-bioc-oligo  ]

Preprocessing tools for oligonucleotide arrays

A package to analyze oligonucleotide arrays (expression/SNP/tiling/exon) at probe-level. It currently supports Affymetrix (CEL files) and NimbleGen arrays (XYS files).

Andere aan r-bioc-oligo gerelateerde pakketten

• dep: libblas3 [sparc64]

  Basic Linear Algebra Reference implementations, shared library

  of libblas.so.3

  virtueel pakket geboden door libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libc6 (>= 2.27) [riscv64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.29) [niet alpha, ia64, riscv64, sh4]

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.29) [alpha]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgfortran5 (>= 8) [sparc64]

  Runtime library for GNU Fortran applications

• dep: liblapack3 [sparc64]

  Library of linear algebra routines 3 - shared version

  of liblapack.so.3

  virtueel pakket geboden door libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: r-api-4.0

  virtueel pakket geboden door r-base-core

• dep: r-api-bioc-3.18

  virtueel pakket geboden door r-bioc-biocgenerics

• dep: r-bioc-affxparser (>= 1.39.4)

  Affymetrix File Parsing SDK

• dep: r-bioc-affyio (>= 1.35.0)

  BioConductor tools for parsing Affymetrix data files

• dep: r-bioc-biobase (>= 2.27.3)

  base functions for Bioconductor

• dep: r-bioc-biocgenerics (>= 0.13.11)

  generic functions for Bioconductor

• dep: r-bioc-biostrings (>= 2.35.12)

  GNU R string objects representing biological sequences

• dep: r-bioc-oligoclasses (>= 1.29.6)

  Classes for high-throughput arrays supported by oligo and crlmm

• dep: r-bioc-preprocesscore (>= 1.29.0)

  BioConductor collection of pre-processing functions

• dep: r-bioc-zlibbioc

  (Virtual) zlibbioc Bioconductor package

• dep: r-cran-dbi (>= 0.3.1)

  GNU R package providing a generic database interface

• dep: r-cran-ff

  Memory-Efficient Fast-Access Storage of Large Data

• dep: r-cran-rsqlite (>= 1.0.0)

  Database Interface R driver for SQLite

• dep: zlib1g (>= 1:1.1.4)

  compressiebibliotheek - programma's

• sug: r-bioc-annotationdbi

  GNU R Annotation Database Interface for BioConductor

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-biomart

  GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)

• sug: r-bioc-genefilter

  methods for filtering genes from microarray experiments

• sug: r-bioc-limma

  linear models for microarray data

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-rcolorbrewer

  GNU R package providing suitable color palettes

• sug: r-cran-rcurl

  GNU R General network (HTTP/FTP/...) client interface

• sug: r-cran-runit

  GNU R package providing unit testing framework

r-bioc-oligo downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	906,7 kB	1.355,0 kB	[overzicht]
amd64	907,7 kB	1.343,0 kB	[overzicht]
arm64	906,1 kB	1.355,0 kB	[overzicht]
armel	906,3 kB	1.334,0 kB	[overzicht]
armhf	904,4 kB	1.322,0 kB	[overzicht]
hppa (unofficial port)	907,4 kB	1.348,0 kB	[overzicht]
i386	909,4 kB	1.346,0 kB	[overzicht]
ia64 (unofficial port)	910,9 kB	1.381,0 kB	[overzicht]
mips64el	905,4 kB	1.358,0 kB	[overzicht]
ppc64 (unofficial port)	910,3 kB	1.420,0 kB	[overzicht]
ppc64el	909,4 kB	1.355,0 kB	[overzicht]
riscv64	907,2 kB	1.331,0 kB	[overzicht]
s390x	908,3 kB	1.343,0 kB	[overzicht]
sh4 (unofficial port)	907,4 kB	1.354,0 kB	[overzicht]
sparc64 (unofficial port)	904,6 kB	2.317,0 kB	[overzicht]
x32 (unofficial port)	907,2 kB	1.338,0 kB	[overzicht]