alle opties
buster  ] [  bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ Bron: chromhmm  ]

Pakket: chromhmm (1.25+dfsg-1)

Verwijzigingen voor chromhmm

Screenshot

Debian bronnen:

Het bronpakket chromhmm downloaden:

Beheerders:

Externe bronnen:

Vergelijkbare pakketten:

Chromatin state discovery and characterization

ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of various histone modifications to discover de novo the major re-occuring combinatorial and spatial patterns of marks. ChromHMM is based on a multivariate Hidden Markov Model that explicitly models the presence or absence of each chromatin mark. The resulting model can then be used to systematically annotate a genome in one or more cell types. By automatically computing state enrichments for large-scale functional and annotation datasets ChromHMM facilitates the biological characterization of each state. ChromHMM also produces files with genome-wide maps of chromatin state annotations that can be directly visualized in a genome browser.

Andere aan chromhmm gerelateerde pakketten

  • depends
  • recommends
  • suggests
  • enhances

chromhmm downloaden

Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
all 193,3 kB209,0 kB [overzicht]