Pakket: proteinortho (5.16.b+dfsg-1)

[ Bron: proteinortho  ]

Detection of (Co-)orthologs in large-scale protein analysis

Proteinortho is a stand-alone tool that is geared towards large datasets and makes use of distributed computing techniques when run on multi-core hardware. It implements an extended version of the reciprocal best alignment heuristic. Proteinortho was applied to compute orthologous proteins in the complete set of all 717 eubacterial genomes available at NCBI at the beginning of 2009. Authors succeeded identifying thirty proteins present in 99% of all bacterial proteomes.

Andere aan proteinortho gerelateerde pakketten

• dep: libc6 (>= 2.14) [amd64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.3.4) [i386]

  dep: libc6 (>= 2.4) [armhf]

• dep: libgcc1 (>= 1:3.0) [niet armhf]

  GCC support bibliotheek

  dep: libgcc1 (>= 1:3.5) [armhf]

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: ncbi-blast+

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• dep: python

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proteinortho downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	139,9 kB	292,0 kB	[overzicht]
arm64	137,0 kB	276,0 kB	[overzicht]
armhf	134,9 kB	255,0 kB	[overzicht]
i386	141,2 kB	287,0 kB	[overzicht]