[ Bron: fermi-lite ]
Pakket: fml-asm (0.1-5)
Verwijzigingen voor fml-asm
Debian bronnen:
Het bronpakket fermi-lite downloaden:
Beheerders:
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
tool for assembling Illumina short reads in small regions
Fml-asm is a command-line tool for assembling Illumina short reads in regions from 100bp to 10 million bp in size, based on the fermi-lite library. It is largely a light-weight in-memory version of fermikit without generating any intermediate files. It inherits the performance, the relatively small memory footprint and the features of fermikit. In particular, fermi-lite is able to retain heterozygous events and thus can be used to assemble diploid regions for the purpose of variant calling.
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