Pakket: sibelia (3.0.7+dfsg-3)

[ Bron: sibelia  ]

comparative genomics tool

Sibelia (Synteny Block ExpLoration tool) is a comparative genomics tool: It assists biologists in analysing the genomic variations that correlate with pathogens, or the genomic changes that help microorganisms adapt in different environments. Sibelia will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms.

Sibelia is useful in finding:

 1) shared regions,
 2) regions that present in one group of genomes but not in others,
 3) rearrangements that transform one genome to other genomes.

Andere aan sibelia gerelateerde pakketten

• dep: lagan

  highly parametrizable pairwise global genome sequence aligner

• dep: libc6 (>= 2.14) [amd64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [niet amd64, arm64, ppc64el]

• dep: libdivsufsort3 (>= 2.0.1)

  fast suffix array construction

• dep: libgcc-s1 (>= 3.0) [niet armel, armhf]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 9)

  GNU Standard C++ Library v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• sug: sibelia-examples

  comparative genomics tool (example data)

sibelia downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	309,7 kB	1.176,0 kB	[overzicht]
arm64	278,3 kB	1.120,0 kB	[overzicht]
armel	283,4 kB	1.139,0 kB	[overzicht]
armhf	289,5 kB	955,0 kB	[overzicht]
i386	312,3 kB	1.151,0 kB	[overzicht]
mips64el	278,1 kB	1.250,0 kB	[overzicht]
mipsel	276,8 kB	1.261,0 kB	[overzicht]
ppc64el	305,1 kB	1.228,0 kB	[overzicht]
s390x	275,7 kB	1.128,0 kB	[overzicht]