Pakket: probalign (1.4-9)

[ Bron: probalign  ]

multiple sequence alignment using partition function posterior probabilities

Probalign uses partition function posterior probability estimates to compute maximum expected accuracy multiple sequence alignments. It performs statistically significantly better than the leading alignment programs Probcons v1.1, MAFFT v5.851, and MUSCLE v3.6 on BAliBASE 3.0, HOMSTRAD, and OXBENCH benchmarks. Probalign improvements are largest on datasets containing N/C terminal extensions and on datasets with long and heterogeneous length sequences. On heteregeneous length datasets containing repeats Probalign alignment accuracy is 10% and 15% higher than the other three methods when standard deviation of length is at least 300 and 400.

Andere aan probalign gerelateerde pakketten

• dep: libc6 (>= 2.27)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libgcc-s1 (>= 3.0) [niet armel, armhf, ppc64el]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.4.4) [ppc64el]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

probalign downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	65,5 kB	172,0 kB	[overzicht]
arm64	63,0 kB	152,0 kB	[overzicht]
armel	55,6 kB	143,0 kB	[overzicht]
armhf	54,6 kB	115,0 kB	[overzicht]
i386	62,0 kB	159,0 kB	[overzicht]
mips64el	67,3 kB	176,0 kB	[overzicht]
mipsel	64,6 kB	170,0 kB	[overzicht]
ppc64el	76,9 kB	220,0 kB	[overzicht]
s390x	58,2 kB	172,0 kB	[overzicht]