[ Bron: metastudent ]
Pakket: metastudent (2.0.1-8)
Verwijzigingen voor metastudent
Debian bronnen:
Het bronpakket metastudent downloaden:
Beheerders:
Externe bronnen:
- Homepage [rostlab.org]
Vergelijkbare pakketten:
predictor of Gene Ontology terms from protein sequence
Often, only the sequence of a protein is known, but not its functions. Metastudent will try to predict missing functional annotations through homology searches (BLAST).
All predicted functions correspond to Gene Ontology (GO) terms from the Molecular Function (MFO), the Biological Process (BPO) and the Cellular Component Ontology (CCO) and are associated with a reliability score.
Andere aan metastudent gerelateerde pakketten
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- dep: default-jre
- Standard Java or Java compatible Runtime
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- dep: libfile-chdir-perl
- more sensible way to change directories
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- dep: libgo-perl (>= 0.15-3)
- perl modules for GO and other OBO ontologies
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- dep: libgraphviz-perl
- Perl interface to the GraphViz graphing tool
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- dep: libipc-run-perl
- Perl module for running processes
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- dep: metastudent-data (>= 2.0.0)
- predictor of Gene Ontology terms from protein sequence - data files
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- dep: ncbi-blast+-legacy
- NCBI Blast legacy call script
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
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- dep: python3
- interactive high-level object-oriented language (default python3 version)