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[ Bron: sga  ]

Pakket: sga (0.10.15-5)

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de novo genome assembler that uses string graphs

The major goal of SGA is to be very memory efficient, which is achieved by using a compressed representation of DNA sequence reads.

SGA is a de novo assembler for DNA sequence reads. It is based on Gene Myers' string graph formulation of assembly and uses the FM-index/Burrows-Wheeler transform to efficiently find overlaps between sequence reads.

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sga downloaden

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Platform Pakketgrootte Geïnstalleerde grootte Bestanden
mips64el 750,3 kB3.008,0 kB [overzicht]