Pakket: bwa (0.7.17-6 en anderen)

[ Bron: bwa  ]

Burrows-Wheeler Aligner

BWA is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome. It consists of three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. The first algorithm is designed for Illumina sequence reads up to 100bp, while the rest two for longer sequences ranged from 70bp to 1Mbp. BWA-MEM and BWA-SW share similar features such as long-read support and split alignment, but BWA-MEM, which is the latest, is generally recommended for high-quality queries as it is faster and more accurate. BWA-MEM also has better performance than BWA-backtrack for 70-100bp Illumina reads.

Tags: Biology: Proteins, Field: Biology, field::biology:bioinformatics, implemented-in::c, User Interface: Command Line, interface::text-mode, role::program, Purpose: Analysing, Comparing

Andere aan bwa gerelateerde pakketten

• dep: libc6 (>= 2.29)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: zlib1g (>= 1:1.1.4)

  compressiebibliotheek - programma's

• rec: perl

  Larry Wall's Practical Extraction and Report Language

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

bwa downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	0.7.17-6+b1	206,7 kB	452,0 kB	[overzicht]
arm64	0.7.17-6+b1	193,2 kB	424,0 kB	[overzicht]
armel	0.7.17-6+b1	192,4 kB	439,0 kB	[overzicht]
armhf	0.7.17-6+b1	192,6 kB	327,0 kB	[overzicht]
i386	0.7.17-6+b1	235,3 kB	531,0 kB	[overzicht]
mips64el	0.7.17-6+b1	205,5 kB	511,0 kB	[overzicht]
mipsel	0.7.17-6+b1	233,1 kB	549,0 kB	[overzicht]
ppc64el	0.7.17-6+b1	224,3 kB	580,0 kB	[overzicht]
s390x	0.7.17-6+b1	193,8 kB	476,0 kB	[overzicht]