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[ Source: terraphast  ]

Package: terraphast (0.1.0+dfsg-1 and others)

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enumerate terraces in phylogenetic tree space

Terraphast takes a .nkw file in Newick format and a genes/sites file, which denotes whether (1) or not (0) gene i is present in species j.

Program output states some imput data properties, the species whose leaf edge is used as a new tree root, and the resulting supertree in compressed newick format.

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Download terraphast

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 0.1.0+dfsg-1 56.0 kB709.0 kB [list of files]
amd64 0.1.0+dfsg-1 60.1 kB311.0 kB [list of files]
arm64 0.1.0+dfsg-1 54.8 kB579.0 kB [list of files]
armhf 0.1.0+dfsg-1 54.5 kB571.0 kB [list of files]
hppa (unofficial port) 0.1.0+dfsg-1 57.3 kB256.0 kB [list of files]
i386 0.1.0+dfsg-1 62.2 kB299.0 kB [list of files]
ia64 (unofficial port) 0.0+git20200413.8af2e4c+dfsg-3 62.5 kB350.0 kB [list of files]
loong64 (unofficial port) 0.1.0+dfsg-1 57.5 kB643.0 kB [list of files]
m68k (unofficial port) 0.1.0+dfsg-1 59.2 kB259.0 kB [list of files]
ppc64 (unofficial port) 0.1.0+dfsg-1 64.3 kB707.0 kB [list of files]
ppc64el 0.1.0+dfsg-1 64.7 kB707.0 kB [list of files]
riscv64 0.1.0+dfsg-1 59.7 kB243.0 kB [list of files]
s390x 0.1.0+dfsg-1 62.6 kB307.0 kB [list of files]
sh4 (unofficial port) 0.1.0+dfsg-1 67.5 kB571.0 kB [list of files]
sparc64 (unofficial port) 0.1.0+dfsg-1 52.0 kB8,269.0 kB [list of files]
x32 (unofficial port) 0.1.0+dfsg-1 60.0 kB283.0 kB [list of files]