Package: libbifrost0 (1.3.5-2 and others)

[ Source: bifrost  ]

library for parallel construction, indexing and querying of de Bruijn graphs

Libbifrost is the shared library for the command-line tool bifrost for sequencing that features a broad range of functions, such as indexing, editing, and querying the graph, and includes a graph coloring method that maps each k-mer of the graph to the genomes it occurs in.

 * Build, index, color and query the compacted de Bruijn graph
 * No need to build the uncompacted de Bruijn graph
 * Reads or assembled genomes as input
 * Output graph in GFA (can be visualized with Bandage), FASTA or binary
 * Graph cleaning: short tip clipping, etc.
 * Multi-threaded
 * No parameters to estimate with other tools
 * Exact or approximate k-mer search of queries

Other Packages Related to libbifrost0

• dep: libc6 (>= 2.38) [not alpha, ia64, loong64]

  GNU C 라이브러리: 공유 라이브러리
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.42) [loong64]

• dep: libc6.1 (>= 2.37) [ia64]

  GNU C 라이브러리: 공유 라이브러리
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.38) [alpha]

• dep: libgcc-s1 (>= 3.0) [arm64, loong64, ppc64el, s390x]

  GCC 기능 지원 라이브러리

  dep: libgcc-s1 (>= 3.4) [alpha, amd64, ppc64, riscv64]

  dep: libgcc-s1 (>= 4.2) [ia64]

  dep: libgcc-s1 (>= 4.3) [sparc64]

• dep: libstdc++6 (>= 13.1) [ia64]

  GNU 표준 C++ 라이브러리 v3

  dep: libstdc++6 (>= 14) [not ia64]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: zlib1g (>= 1:1.1.4)

  압축 라이브러리 - 런타임

Download libbifrost0

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	1.3.5-2	422.4 kB	1,589.0 kB	[list of files]
amd64	1.3.5-2	451.7 kB	1,512.0 kB	[list of files]
arm64	1.3.5-2	411.4 kB	1,388.0 kB	[list of files]
ia64 (unofficial port)	1.3.1-1	509.9 kB	2,582.0 kB	[list of files]
loong64	1.3.5-2	432.3 kB	1,516.0 kB	[list of files]
ppc64 (unofficial port)	1.3.5-2	470.6 kB	1,837.0 kB	[list of files]
ppc64el	1.3.5-2	473.1 kB	1,708.0 kB	[list of files]
riscv64	1.3.5-2	452.7 kB	1,128.0 kB	[list of files]
s390x	1.3.5-2	473.9 kB	1,632.0 kB	[list of files]
sparc64 (unofficial port)	1.3.5-2	385.7 kB	2,123.0 kB	[list of files]