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[ Source: arden  ]

Package: arden (1.0-1)

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specificity control for read alignments using an artificial reference

ARDEN (Artificial Reference Driven Estimation of false positives in NGS data) is a novel benchmark that estimates error rates based on real experimental reads and an additionally generated artificial reference genome. It allows the computation of error rates specifically for a dataset and the construction of a ROC-curve. Thereby, it can be used to optimize parameters for read mappers, to select read mappers for a specific problem or also to filter alignments based on quality estimation.

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Download for all available architectures
Architecture Package Size Installed Size Files
amd64 88.4 kB1,161.0 kB [list of files]
armel 87.1 kB1,161.0 kB [list of files]
armhf 87.2 kB1,161.0 kB [list of files]
i386 88.2 kB1,103.0 kB [list of files]