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[ Source: anfo  ]

Package: anfo (0.98-4 and others)

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Short Read Aligner/Mapper from MPG

Anfo is a mapper in the spirit of Soap/Maq/Bowtie, but its implementation takes more after BLAST/BLAT. It's most useful for the alignment of sequencing reads where the DNA sequence is somehow modified (think ancient DNA or bisulphite treatment) and/or there is more divergence between sample and reference than what fast mappers will handle gracefully (say the reference genome is missing and a related species is used instead).

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Download anfo

Download for all available architectures
Architecture Version Package Size Installed Size Files
amd64 0.98-4+b1 116.5 kB387.0 kB [list of files]
armel 0.98-4+b1 102.7 kB392.0 kB [list of files]
armhf 0.98-4+b1 104.4 kB328.0 kB [list of files]
i386 0.98-4+b1 115.1 kB345.0 kB [list of files]
mips 0.98-4+b1 106.4 kB441.0 kB [list of files]
mipsel 0.98-4+b1 107.6 kB391.0 kB [list of files]
powerpc 0.98-4+b1 109.1 kB416.0 kB [list of files]
s390x 0.98-4+b1 117.0 kB477.0 kB [list of files]