"wheezy" のサブセクション science に含まれるソフトウェアパッケージ

3depict (0.0.10-1+b1 [amd64], 0.0.10-1 [armel, armhf, i386, ia64, mips, mipsel, powerpc, s390, s390x, sparc])

単一値ポイントデータ用可視化・解析ツール

abacas (1.3.1-1)

組み立てシーケンスのアルゴリズムによる自動断片連結

abinit (5.3.4.dfsg-3+b1 [mips, mipsel], 5.3.4.dfsg-3 [amd64, armel, armhf, i386, ia64, kfreebsd-amd64, kfreebsd-i386, powerpc, s390, s390x, sparc])

A package for electronic structure calculations

abyss (1.3.4-3) [non-free]

de novo, parallel, sequence assembler for short reads

acedb-other (4.9.39+dfsg.01-5)

DNA およびタンパク質配列の取得

acedb-other-belvu (4.9.39+dfsg.01-5)

multiple sequence alignment editor

acedb-other-dotter (4.9.39+dfsg.01-5)

visualisation of sequence similarity

aces3 (3.0.6-7)

Advanced Concepts in Electronic Structure III

achilles (2-8)

人工生命と進化のシミュレータ

aeskulap (0.2.2b1-11)

医療画像ビューアおよび DICOM ネットワーククライアント

aghermann (0.6.0.1-1)

Sleep-research experiment manager

algotutor (0.8.6-1)

program for observing the intermediate steps of algorithm

alien-hunter (1.7-1)

Interpolated Variable Order Motifs to identify horizontally acquired DNA

altree (1.2.1-1)

program to perform phylogeny-based association and localization analysis

altree-examples (1.2.1-1)

example files for ALTree

amap-align (2.2-3)

Protein multiple alignment by sequence annealing

ampliconnoise (1.25-1)

Programs for the removal of noise from 454 sequenced PCR amplicons

ants (1.9.2+svn680.dfsg-4)

advanced normalization tools for brain and image analysis

apbs (1.3.0-2)

アダプティブポアソンボルツマンソルバ

astronomical-almanac (5.6-4)

天文学的暦 - 惑星や恒星の位置を計算

autodock (4.2.3-2)

タンパク質構造に結合するリガンドの分析ツール

autodock-getdata (4.2.3-2)

instructions for getData to collect compounds

autodock-test (4.2.3-2)

test files for AutoDock

autodock-vina (1.1.2-2+b1)

docking of small molecules to proteins

autodocktools (1.5.6~rc3~cvs.20120206-1) [non-free]

GUI to help set up, launch and analyze AutoDock dockings

autogrid (4.2.3-2)

リガンドの受容体への結合を事前計算

autogrid-test (4.2.3-2)

test files for AutoGrid

avce00 (2.0.0-2)

Tools for conversion of ESRI Arcinfo (binary) Vector Coverage in E00 format.

avogadro (1.0.3-5)

分子可視化およびモデリングシステム

avogadro-data (1.0.3-5)

分子グラフィックスおよびモデリングシステム (データファイル)

aweather (0.7-1)

Advanced Weather Monitoring Program

ballview (1.4.1+20111206-4)

free molecular modeling and molecular graphics tool

bauble (0.9.7-2)

biodiversity collection manager software application

bedtools (2.16.1-1)

suite of utilities for comparing genomic features

bibus (1.5.2-1)

bibliographic database

biogenesis (0.8-1+deb7u1) [security]

生物の進化をシミュレートする人工生命プログラム

biomaj (1.2.1-1)

biological data-bank updater

biomaj-properties (1.2.1-1)

biological data-bank updater - example properties files

biomaj-watcher (1.2.1-1) [contrib]

biological data-bank updater - web interface

bioperl (1.6.901-3)

Perl tools for computational molecular biology

bioperl-run (1.6.9-1)

BioPerl wrappers: scripts

biosig-tools (1.3.0-2)

生物医学データフォーマット変換ツール

biosquid (1.9g+cvs20050121-2)

生物学における配列解析ツール

bist (0.5.2-1)

化学描画ツール

bkchem (0.13.0-4)

Chemical structures editor

blast2 (1:2.2.26.20120620-2)

基本的なローカル配列検索ツール

blimps-utils (3.9-1) [non-free]

blocks database improved searcher

bodr (9-1)

Blue Obelisk Data Repository

boolector (1.4.ffc2089.100608-1)

ビットベクトルおよび配列向け SMT ソルバー

bowtie (0.12.7-3)

ultrafast memory-efficient short read aligner

bowtie-examples (0.12.7-3)

Examples for bowtie, the ultrafast memory-efficient short read aligner

bowtie2 (2.0.0-beta6-3)

ultrafast memory-efficient short read aligner

bowtie2-examples (2.0.0-beta6-3)

Examples for bowtie2,

boxshade (3.3.1-7+wheezy1)

多重配列アライメントのプリティプリンティング

bppphyview (0.2.1-1)

Bio++ 系統発生ビューア

bppsuite (0.7.0-1)

Bio++ program suite

bwa (0.6.2-1)

Burrows-Wheeler Aligner

cain (1.9-4)

simulations of chemical reactions

cain-examples (1.9-4)

simulations of chemical reactions

cain-solvers (1.9-4)

simulations of chemical reactions

caret (5.6.4~dfsg.1-3)

Computerized Anatomical Reconstruction and Editing Toolkit

cba (0.3.6-4)

Continuous Beam Analysis

cbflib-bin (0.7.9.1-3)

utilities to manipulate CBF files

cbmc (4.1-1.2)

bounded model checker for C and C++ programs

cclib (1.0.1-2)

Parsers and algorithms for computational chemistry

cclib-data (1.0.1-3) [non-free]

Parsers and algorithms for computational chemistry (data files)

cd-hit (4.6-2012-04-25-1)

suite of programs designed to quickly group sequences

celestia (1.6.1+dfsg-2)

リアルタイムビジュアル宇宙シミュレーション

celestia-common (1.6.1+dfsg-2)

リアルタイムビジュアル宇宙シミュレーション Celestia 用データファイル

celestia-common-nonfree (1.6.1-1) [non-free]

Non-free datafiles for Celestia, a real-time visual space simulation

celestia-glut (1.6.1+dfsg-2)

real-time visual space simulation (GLUT frontend)

cernlib (20061220+dfsg3-2)

CERNLIB data analysis suite - general use metapackage

cernlib-core (20061220+dfsg3-2)

CERNLIB data analysis suite - main libraries and programs

cernlib-extras (20061220+dfsg3-2)

CERNLIB data analysis suite - extra programs

cernlib-montecarlo (20061220+dfsg3-2)

CERNLIB Monte Carlo libraries

cgns-convert (3.1.3.4-1+b1)

CFD General Notation System - Conversion tools

chemical-structures (2.2.dfsg.0-8)

set of molecular structures in open formats

chemtool (1.6.13-1)

chemical structures drawing program

circos (0.61-3)

データ可視化用プロット作成ツール

circos-tools (0.16-2)

Helper tools for Circos

clinica (0.2.1~dfsg-1)

Simple medical records manager

clinica-common (0.2.1~dfsg-1)

Simple medical records manager (architecture independent files)

clinica-dev (0.2.1~dfsg-1)

Simple medical records manager (development files)

clinica-plugins (0.2.1~dfsg-1)

Simple medical records manager (plugins)

clonalframe (1.2-3)

inference of bacterial microevolution using multilocus sequence data

clustalo (1.1.0-1)

General purpose multiple sequence alignment program for proteins

clustalw (2.1+lgpl-2)

global multiple nucleotide or peptide sequence alignment

clustalw-mpi (0.15-2) [non-free]

MPI-distributed global sequence alignment with ClustalW

clustalx (2.1+lgpl-2)

Multiple alignment of nucleic acid and protein sequences (graphical interface)

cmtk (2.2.2-2)

Computational Morphometry Toolkit

code-saturne (2.1.7-1)

General purpose Computational Fluid Dynamics (CFD) software

code-saturne-bin (2.1.7-1)

General purpose Computational Fluid Dynamics (CFD) software - binaries

code-saturne-data (2.1.7-1)

General purpose Computational Fluid Dynamics (CFD) software - data

code-saturne-doc (2.1.7-1)

General purpose Computational Fluid Dynamics (CFD) software - Documentation

code-saturne-include (2.1.7-1)

General purpose Computational Fluid Dynamics (CFD) software - includes

coinor-csdp (6.1.1-1)

A software package for semidefinite programming

coinor-libflopc++0 (1.0.6-3.1)

Formulation of Linear Optimization Problems in C++

condor (7.8.2~dfsg.1-1+deb7u3)

distributed workload management system

cp2k (2.2.426-8)

Ab Initio Molecular Dynamics

cp2k-data (2.2.426-8)

Ab Initio Molecular Dynamics (data files)

critterding (1.0-beta12.1-1.2)

Evolving Artificial Life

cufflinks (1.3.0-2) [non-free]

Transcript assembly, differential expression and regulation for RNA-Seq

dans-gdal-scripts (0.18-1.1+b2)

Geographic Information Network of Alaska により寄贈された GDAL ツール

dcmtk (3.6.0-12+deb7u1 [amd64, armel, armhf, i386], 3.6.0-12 [ia64, kfreebsd-amd64, kfreebsd-i386, mips, mipsel, powerpc, s390, s390x, sparc]) [security]

OFFIS DICOM ツールキットのコマンドライン版ユーティリティ

dialign (2.2.1-5)

Segment-based multiple sequence alignment

dialign-tx (1.0.2-2)

セグメントベースの多重配列アライメント

dialign-tx-data (1.0.2-2)

Common data files for dialign-tx

dicompyler (0.4.1-1-1)

radiation therapy research platform

diet-agent (2.8.0-1+b1)

DIET grid middleware - agent

dimbl (0.11-1)

Distributed Memory Based Learner

disulfinder (1.2.11-2+b1)

cysteines disulfide bonding state and connectivity predictor

disulfinder-data (1.2.11-2)

data files for predictor of disulfide bonds in proteins

dotur (1.53-2)

distance based OTU and richness estimation

dozzaqueux (3.21-4)

simulator for chemical mixtures

dozzaqueux-data (3.21-4)

databases for chemical mixtures

drawmap (2.5-3)

生の USGS データファイルから、カスタマイズされた地図を作成

drawxtl (5.5-3)

crystal structure viewer

drslib (0.3.0a3-3)

Command-line tools for the Data Reference Syntax library

dsdp (5.8-9.1)

Software for Semidefinite Programming

dssp (2.0.4-2)

protein secondary structure assignment based on 3D structure

dx (1:4.4.4-4+b2)

OpenDX (IBM Visualization Data Explorer) - メインパッケージ

dxsamples (4.2.0-1)

OpenDX データエクスプローラ用サンプルプログラム

e00compr (1.0.1-2)

A program to read/write Arcinfo compressed E00 files

easychem (0.6-7)

高品質な分子構造や二次元化学公式を表示

ecaccess (4.0.0-3)

clients to access ECMWF facilities

edfbrowser (1.48-1)

viewer for biosignal storage files such as bdf and edf

eficas (6.4.0-1-1.1)

Graphical editor for Code Aster command files

elastix (4.5-2)

toolbox for rigid and nonrigid registration of images

elki (0.5.0-1)

Data mining algorithm development framework

elmer (6.1.0.svn.5396.dfsg2-2)

finite element multiphysics suite - binaries

elmer-common (6.1.0.svn.5396.dfsg2-2)

finite element multiphysics suite - architecture-independent files

embassy-domainatrix (0.1.0+20110714-1)

Extra EMBOSS commands to handle domain classification file

embassy-domalign (0.1.0+20110714-1)

Extra EMBOSS commands for protein domain alignment

embassy-domsearch (1:0.1.0+20110714-1)

Extra EMBOSS commands to search for protein domains

embassy-phylip (3.69+20110714-1) [non-free]

EMBOSS conversions of the programs in the phylip package

emboss (6.4.0-2)

european molecular biology open software suite

emboss-data (6.4.0-2)

EMBOSS パッケージ用データファイル

emboss-explorer (2.2.0-7+deb7u1)

web-based GUI to EMBOSS

emboss-lib (6.4.0-2)

EMBOSS ライブラリ

engauge-digitizer (5.0-3)

対話形式でビットマップのグラフや地図から数値を抽出

ent (1.1debian-2)

疑似乱数列試験プログラム

epigrass (2.0.4-3)

ネットワーク疫学におけるシミュレーションとシナリオ分析用の科学研究ツール

epsilon-bin (0.9.1-2)

A library for wavelet image compression - tools

esorex (3.9.6-1)

Execution Tool for European Southern Observatory pipelines

esys-particle (2.1-4)

Software for particle-based numerical modelling. MPI version.

etsf-io (1.0.3-4+b1)

Binary tools to check, merge and read ETSF files

exonerate (2.2.0-6)

generic tool for pairwise sequence comparison

expeyes (2.0.0-3)

科学実験開発のためのハードウェアとソフトウェアのフレームワーク

extrema (4.4.5.dfsg-3)

powerful visualization and data analysis tool

fastdnaml (1.2.2-10)

Tool for construction of phylogenetic trees of DNA sequences

fastlink (4.1P-fix95-3)

faster version of pedigree programs of Linkage

fasttree (2.1.4-1)

phylogenetic trees from alignments of nucleotide or protein sequences

fastx-toolkit (0.0.13.2-1)

FASTQ/A short nucleotide reads pre-processing tools

fcc (2.7-1)

Script to compile C/C++ programs and link to Fortran libraries

ffindex (0.9.6.1-1)

simple index/database for huge amounts of small files

figtree (1.3.1-1)

グラフィカルな系統樹ビューア

filo (1.1+2011020401.2)

FILe and stream Operations

fityk (0.9.8-3+b1)

汎用非線形曲線当てはめおよびデータ分析

freeaccount (0.7.6-1)

medical accountancy manager

freediams (0.7.6-1)

医薬品用処方箋・相互作用マネージャ

freemedforms-common-resources (0.7.6-1)

FreeMedForms プロジェクトのアプリケーション用共通データ

freemedforms-emr (0.7.6-1)

電子医療記録マネージャー

freemedforms-emr-resources (0.7.6-1)

data for the FreeMedForms EMR

freemedforms-freedata (0.7.6-1)

free extra-data for the FreeMedForms project

freemedforms-libs (0.7.6-1)

common libs for the FreeMedForms project

freemedforms-project (0.7.6-1)

FreeMedForms project

freemedforms-theme (0.7.6-1)

theme for the FreeMedForms project

frog (0.12.15-3)

tagger and parser for Dutch language

frogdata (0.3-2)

Data files for Frog

fsl (4.1.9-7) [non-free]

Metapackage for the latest version of FSL

fsl-4.1 (4.1.9-7) [non-free]

analysis tools for FMRI, MRI and DTI brain imaging

funtools (1.4.4-3)

Minimal buy-in FITS utility package

fxt-tools (0.2.6-2)

Multithreaded tracing library

g3data (1:1.5.3-2)

スキャンされたグラフからデータを抽出

gabedit (2.4.2-2)

Ab Initio パッケージ用 GUI

gamgi (0.15.8-1)

汎用原子レベルモデリンググラフィックインターフェース (GAMGI)

gamgi-data (0.15.8-1)

General Atomistic Modelling Graphic Interface (データ)

garlic (1.6-1.1)

生体分子の視覚化プログラム

gausssum (2.2.5-2)

Gaussian、GAMESS などの出力を解釈して表示

gbrowse (2.48~dfsg-1)

GMOD Generic Genome Browser

gbrowse-calign (2.48~dfsg-1)

CAlign helper

gbrowse-data (2.48~dfsg-1)

Sample data to use GBrowse

gchempaint (0.12.12-1)

GNOME2 デスクトップ向け二次元化学構造エディタ

gcrystal (0.12.12-1)

軽量な水晶構造可視化ツール

gcu-bin (0.12.12-1)

GNOME 化学ユーティリティ (補助アプリケーション)

gcu-plugin (0.12.12-1)

GNOME chemistry utils (browser plugin)

gcx (1.3-1.1)

astronomical image processing and photometry gtk+ application

gdal-bin (1.9.0-3.1)

地理空間データ抽出ライブラリ - ユーティリティプログラム

gdis (0.90-4)

molecular and crystal model viewer

gdis-data (0.90-4)

molecular and crystal model viewer (data files)

gdpc (2.2.5-2)

分子動力学シミュレーションの視覚化プログラム

gdpc-examples (2.2.5-2)

gdpc プログラム用のサンプルファイル

geant321 (1:3.21.14.dfsg-10)

[Physics] Particle detector description and simulation tool

geant321-data (1:3.21.14.dfsg-10)

[Physics] Data for GEANT 3.21 detector simulator

gelemental (1.2.0-8)

周期表ビューア

gentle (1.9+cvs20100605+dfsg1-1)

suite to plan genetic cloning

geographiclib-tools (1.21-1)

A C++ library to solve some geodesic problems -- tools

geotiff-bin (1.3.0+dfsg-3)

the GeoTIFF library -- tools

getdata (0.1-1)

management of external databases

gff2aplot (2.0-7)

PostScript によるゲノム配列用のペアワイズアライメント (整列) プロット

gff2ps (0.98d-4)

GFF ファイルから PostScript 画像出力を作成

ghkl (4.0.3-4)

diffractometer computation control application

ginkgocadx (2.12.0.4889-1)

Medical Imaging Software and complete DICOM Viewer

glam2 (1064-1)

gapped protein motifs from unaligned sequences

gliese (3.0.95-2) [non-free]

stellar data set from the Third Catalogue of Nearby Stars

gmap (2012-06-12-1) [non-free]

spliced and SNP-tolerant alignment for mRNA and short reads

gmt (4.5.7-2)

Generic Mapping Tools

gofigure2 (0.9.0-1+b2 [amd64, armel, i386, ia64, kfreebsd-amd64, kfreebsd-i386, mips, mipsel, powerpc, s390, sparc], 0.9.0-1+b1 [armhf, s390x])

生体イメージングの可視化、加工、分析用ツール

gperiodic (2.0.10-7)

元素周期表アプリケーション

gpiv (0.6.1-2+b1 [armel, mips, mipsel, s390, sparc], 0.6.1-2 [amd64, armhf, i386, ia64, kfreebsd-amd64, kfreebsd-i386, powerpc, s390x])

粒子画像流速測定のための GUI プログラム

gpiv-mpi (0.6.1-2+b1 [armel, mips, mipsel, s390, sparc], 0.6.1-2 [amd64, armhf, i386, ia64, kfreebsd-amd64, kfreebsd-i386, powerpc, s390x])

GUI program for Particle Image Velocimetry - MPI version

gpivtools (0.6.0-3)

command line programs for Particle Image Velocimetry

gpivtools-mpi (0.6.0-3)

command line programs for Particle Image Velocimetry - MPI version

gpx2shp (0.69-3.1)

GPS 又は GPX ファイルを ERSI シェイプファイルに変換

grass (6.4.2-2)

地理的リソース解析支援システム (GRASS GIS)

grass-core (6.4.2-2)

GRASS GIS コアコンポーネント

grass-gui (6.4.2-2)

GRASS GIS グラフィカルユーザインターフェース

gri (2.12.23-2.2)

a language for scientific illustration

grinder (0.4.5-1)

Versatile omics shotgun and amplicon sequencing read simulator

gromacs (4.5.5-2)

構築と解析ツールを含む分子動力学シミュレータ

gromacs-data (4.5.5-2)

GROMACS molecular dynamics sim, data and documentation

gromacs-mpich (4.5.5-2)

Molecular dynamics sim, binaries for MPICH parallelization

gromacs-openmpi (4.5.5-2)

Molecular dynamics sim, binaries for OpenMPI parallelization

gvb (1.2.1-1)

visual simulator of 1 and 2-dimensional vibrations

gwyddion (2.28-2)

Scanning Probe Microscopy visualization and analysis tool

gwyddion-common (2.28-2)

architecture-independent files for Gwyddion SPM analysis tool

gwyddion-plugins (2.28-2)

plugins for Gwyddion SPM analysis tool

gyoto (0.0.3-5)

General relativistic ray-tracing

h5utils (1.12.1-2)

HDF5 ファイル可視化ツール

harminv (1.3.1-9)

extraction of complex frequencies and amplitudes from time series

hdf5-helpers (1.8.8-9+deb7u1 [amd64, armel, armhf, i386], 1.8.8-9+b1 [kfreebsd-amd64, kfreebsd-i386], 1.8.8-9 [ia64, mips, mipsel, powerpc, s390, s390x, sparc]) [security]

Hierarchical Data Format 5 (HDF5) - Helper tools

hdf5-tools (1.8.8-9+deb7u1 [amd64, armel, armhf, i386], 1.8.8-9+b1 [kfreebsd-amd64, kfreebsd-i386], 1.8.8-9 [ia64, mips, mipsel, powerpc, s390, s390x, sparc]) [security]

階層化データ形式 5 (HDF5) - ランタイムツール集

hhsuite (2.0.15-1)

sensitive protein sequence searching based on HMM-HMM alignment

hhsuite-data (2.0.15-1)

sensitive protein sequence searching based on HMM-HMM alignment (data)

hmmer (3.0-4)

タンパク質配列解析用のプロファイル隠れマルコフモデル

hodie (1.5-1)

ラテン語で日付を表示するプログラム

horae (071~svn536-1) [contrib]

interactive graphical processing and analysis of EXAFS data

hpcc (1.4.1-2+b1 [armel, mips, mipsel, s390, sparc], 1.4.1-2 [amd64, armhf, i386, ia64, kfreebsd-amd64, kfreebsd-i386, powerpc, s390x])

HPC Challenge ベンチマーク

ifeffit (2:1.2.11d-8+b1 [sparc], 2:1.2.11d-8 [amd64, armel, armhf, i386, ia64, kfreebsd-amd64, kfreebsd-i386, mips, mipsel, powerpc, s390, s390x]) [contrib]

Interactive XAFS analysis program

ifrit (3.3.4-3)

powerful tool for visualizing 3-dimensional data sets

igv (2.0.30-1) [non-free]

Integrative Genomics Viewer

imagej (1.46a-1+deb7u1) [security]

Macintosh 版 NIH Image から着想を得た画像処理プログラム

imagevis3d (2.0.1-5)

desktop volume rendering application for large data

indigo-utils (1.0.0-2)

Organic Chemistry Toolkit Utilities

infernal (1.0.2-2)

inference of RNA secondary structural alignments

itksnap (2.2.0-1.1)

semi-automatic segmentation of structures in 3D images

jalview (2.7.dfsg-2+deb7u1) [security]

multiple alignment editor

jblas (1.2.0-4)

fast linear algebra library for Java

jellyfish (1.1.5-1)

count k-mers in DNA sequences

jemboss (6.4.0-2)

EMBOSS へのグラフィカルユーザインターフェース

jmol (12.2.32+dfsg2-1)

分子ビューア

kalign (1:2.03+20110620-2)

グローバルおよびプログレッシブ多重配列アライメント

kalzium (4:4.8.4-1)

periodic table and chemistry tools

kalzium-data (4:4.8.4-1)

Kalzium 用データファイル

klustakwik (2.0.1-1)

automatic sorting of the samples (spikes) into clusters

kst (2.0.3-1.3)

scientific data plotting tool

kst-data (2.0.3-1.3)

set of data files for kst

kstars (4:4.8.4-1)

desktop planetarium for KDE

kstars-data (4:4.8.4-1)

KStars デスクトッププラネタリウム用データファイル

kstars-data-extra-tycho2 (1.1r1-9) [non-free]

Tycho-2 star catalog for KStars

kxterm (20061220+dfsg3-2)

CERNLIB データ分析スイート - KUIP ターミナルエミュレータ

lammps (0~20120615.gite442279-1)

Molecular Dynamics Simulator.

last-align (199-1)

genome-scale comparison of biological sequences

lbt (1.2.2-5)

LTL 論理式から Büchi オートマトンに変換

lhapdf-pdfsets-minimal (5.8.7+repack-1)

Minimal PDF Sets of LHAPDF

libball1.4-data (1.4.1+20111206-4)

Biochemical Algorithms Library

libgeotiff-epsg (1.3.0-1) [non-free]

the GeoTIFF library -- EPSG Geodetic Parameter Dataset

libghemical-data (3.0.0-2)

Molecular Modelling Library (data files)

liblas-bin (1.2.1-5+b1)

ASPRS LiDAR data translation toolset

liblinear-tools (1.8+dfsg-1)

LIBLINEAR 用スタンドアロンアプリケーション

libocas-tools (0.93-1)

OCAS ソルバを実装するスタンドアロンアプリケーション

libsilo-bin (4.8-13)

Utilities to manipulate libsilo files

libxy-bin (0.8-1+b1)

xylib - utilities

liggghts (1.5.3-1)

Open Source DEM Particle Simulation Software.

logcentral (2.7-1)

Logging service for distributed applications

logcentral-tools (2.7-1)

Logging service for distributed applications

loki (2.4.7.4-4)

一般的な家系の MCMC 連鎖分析

looptools (2.7-1)

Integral Evaluator of One-loop Feynman Diagram

lutefisk (1.0.5a.cleaned-1)

de novo interpretation of peptide CID spectra

mafft (6.864-1)

Multiple alignment program for amino acid or nucleotide sequences

maq (0.7.1-5)

maps short fixed-length polymorphic DNA sequence reads to reference sequences

maqview (0.2.5-4)

短い遺伝子配列用のグラフィカル読み取りアライメントビューア

massxpert (3.2.3-1)

linear polymer mass spectrometry software

massxpert-data (3.2.3-1)

linear polymer mass spectrometry software - arch-indep data

matlab-gdf (0.1.2-2) [contrib]

IO library for the GDF -- Matlab interface

maude (2.6-2)

high-performance logical framework

mayavi2 (4.1.0-1)

scientific visualization package for 2-D and 3-D data

mbt (3.2.8-1)

memory-based tagger-generator and tagger

mbtserver (0.5-2)

Server extensions for the MBT tagger

meep (1.1.1-8+deb7u1)

software package for FDTD simulation

meep-lam4 (1.1.1-10~deb7u1)

software package for FDTD simulation, parallel (OpenMPI) version

meep-mpi-default (1.1.1-10~deb7u1)

software package for FDTD simulation, parallel (OpenMPI) version

meep-mpich2 (1.1.1-10~deb7u1)

software package for FDTD simulation, parallel (OpenMPI) version

meep-openmpi (1.1.1-9~deb7u2)

software package for FDTD simulation, parallel (OpenMPI) version

melting (4.3c-2)

compute the melting temperature of nucleic acid duplex

melting-gui (4.3c-2)

graphical interface to compute the melting temperature of nucleic acid duplex

merkaartor (0.18.1-3)

map editor for OpenStreetMap.org

mgltools-bhtree (1.5.6~rc3~cvs.20120206-1) [non-free]

Bhtree library extension module

mgltools-cadd (1.5.6~rc3~cvs.20120206-1) [non-free]

Computer Aided Drug Discovery (CADD) Pipeline

mgltools-dejavu (1.5.6~rc3~cvs.20120206-1) [non-free]

visualization of 3D geometry using the OpenGL with Python

mgltools-geomutils (1.5.6~rc3~cvs.20120601-1) [non-free]

Python library for geometric analyses

mgltools-mglutil (1.5.6~rc3~cvs.20120206-1) [non-free]

Molecular Graphics Laboratory utility collection

mgltools-molkit (1.5.6~rc3~cvs.20120206-1) [non-free]

Python classes to read and manipulate molecules

mgltools-networkeditor (1.5.6~rc3~cvs.20120206-1) [non-free]

Python GUI library for the editing of networks

mgltools-opengltk (1.5.6~rc3~cvs.20120601-2) [non-free]

Opengltk Python extension

mgltools-pmv (1.5.6~rc3~cvs.20120206-1) [non-free]

Python-based Molecular Viewer

mgltools-pmv-test (1.5.6~rc3~cvs.20120206-1) [non-free]

Python-based Molecular Viewer (functionality tests)

mgltools-pyautodock (1.5.6~rc3~cvs.20120206-1) [non-free]

Python implementation of autodock

mgltools-pybabel (1.5.6~rc3~cvs.20120206-1) [non-free]

molecular structure file access and interpretation

mgltools-pyglf (1.5.6~rc3~cvs.20120601-1) [non-free]

GLF library Python extension to write text in OpenGL

mgltools-scenario2 (1.5.6~rc3~cvs.20120206-1) [non-free]

Python-based viewer of molecular structures

mgltools-sff (1.5.6~rc3~cvs.20120206-1) [non-free]

Simple Force Field for Python

mgltools-support (1.5.6~rc3~cvs.20120206-1) [non-free]

Update mechanism of MGLTools

mgltools-symserv (1.5.6~rc3~cvs.20120206-1) [non-free]

Symetry server

mgltools-utpackages (1.5.6~rc3~cvs.20120601-1) [non-free]

UT Austin software Python extensions

mgltools-viewerframework (1.5.6~rc3~cvs.20120206-2) [non-free]

ViewerFramework supports building visualization applications

mgltools-vision (1.5.6~rc3~cvs.20120601-1) [non-free]

Python-based Visual Programming Environment

mgltools-visionlibraries (1.5.6~rc3~cvs.20120601-1) [non-free]

Extensions for Python-based Visual Programming Environment

mgltools-volume (1.5.6~rc3~cvs.20120206-1) [non-free]

Volume rendering Python package

mgltools-webservices (1.5.6~rc3~cvs.20120206-1) [non-free]

webservices for components of autodocktools

minc-tools (2.1.10-1+b1)

MNI 医用画像フォーマット用ツール

minisat (1:2.2.1-3)

Fast and lightweight SAT solver

minisat+ (1.0-2)

solver for pseudo-Boolean constraints

minisat2 (1:2.2.1-3)

Transitional package for minisat

minisat2

以下のパッケージによって提供される仮想パッケージです: minisat

mipe (1.1-4)

PCR 派生データ保存用ツール

mira-assembler (3.4.0.1-3)

Whole Genome Shotgun and EST Sequence Assembler

mira-examples (3.4.0.1-3)

files to experiment with the mira assembler

mitools (1.8.5-2)

view, convert and perform basic maths with medical image datasets

mlv-smile (1.47-3)

Find statistically significant patterns in sequences

mmass (5.1.0-2)

Mass spectrometry tool for proteomics

mmass-modules (5.1.0-2)

Mass spectrometry tool for proteomics - extension modules

mobyle (1.0.6~dfsg-1)

Web portal that provides web forms for command-line software

mobyle-programs (4.0-1)

Program descriptions for the mobyle portal

mobyle-utils (1.0.6~dfsg-1)

binary tools used by Mobyle

mona (1.4-13-3)

オートマトンを基にした定理証明ツール

montecarlo-base (20061220+dfsg3-2)

[Physics] Common files for CERNLIB Monte Carlo libraries

montecarlo-data (20061220+dfsg3-2)

[Physics] data for CERNLIB Monte Carlo libraries

mopac7-bin (1.15-5)

半経験的な量子化学ライブラリ (バイナリ)

morse-simulator (0.5.2-1)

Multi-OpenRobot Simulation Engine

morse-simulator-data (0.5.2-1)

Multi-OpenRobot Simulation Engine

mothur (1.24.1-1)

微生物の研究のための配列解析スイート

mozilla-biofox (1.6-1)

Iceape および Iceweasel ブラウザの為のバイオインフォマティクスツール用拡張機能

mpb (1.4.2-18)

MIT Photonic-Bands

mpb-mpi (1.4.2-18)

MIT Photonic-Bands, 並列 (mpich) バージョン

mpqc (2.3.1-14)

Massively Parallel Quantum Chemistry Program

mpqc-openmpi (2.3.1-14)

Massively Parallel Quantum Chemistry Program (OpenMPI transitional package)

mpqc-support (2.3.1-14)

Massively Parallel Quantum Chemistry Program (support tools)

mrbayes (3.2.1+dfsg-1)

Bayesian Inference of Phylogeny

mrbayes-mpi (3.2.1+dfsg-1)

Bayesian Inference of Phylogeny - mpi version

mriconvert (2.0.235-1)

medical image file conversion utility

mricron (0.20120505.1~dfsg.1-1)

核磁気共鳴画像の変換、表示、分析

mricron-data (0.20120505.1~dfsg.1-1)

data files for MRIcron

mrtrix (0.2.10-2)

diffusion-weighted MRI white matter tractography

mssstest (3.0-3) [non-free]

Normalisation of disease scores for patients with Multiple Sclerosis

mummer (3.23~dfsg-2)

遺伝子全体の効率的な配列アライメント

muscle (1:3.8.31-1)

タンパク質配列のマルチプルアライメントプログラム

music-bin (1.0.7-1.2)

Multi-Simulation Coordinator for MPI -- Utilities

mustang (3.2.1-3)

multiple structural alignment of proteins

mustang-testdata (3.2.1-3)

multiple structural alignment of proteins, test data

ncbi-blast+ (2.2.26-3)

next generation suite of BLAST sequence search tools

ncbi-blast+-legacy (2.2.26-3)

NCBI Blast legacy call script

ncbi-epcr (2.3.12-1-1)

DNA 配列への sequence tagged sites の存在をテストするツール

ncbi-rrna-data (6.1.20120620-2)

large rRNA BLAST databases distributed with the NCBI toolkit

ncbi-tools-bin (6.1.20120620-2)

NCBI libraries for biology applications (text-based utilities)

ncbi-tools-x11 (6.1.20120620-2)

生物学アプリケーション用 NCBI ライブラリ (Xベースユーティリティ)

nco (4.0.9-1+b1)

command-line operators to analyze netCDF files

ncoils (2002-3)

coiled coil secondary structure prediction

ncview (1.93g-1+b3 [armel, i386, ia64], 1.93g-1+b2 [amd64, kfreebsd-amd64, kfreebsd-i386, mips, mipsel, powerpc, s390, sparc], 1.93g-1+b1 [armhf, s390x])

NetCDF 形式のファイル用の視覚的な X11 向けブラウザ

necpp (1.5.0+cvs20101003-2.1)

NEC2 Evolution Antenna Modelling System

neobio (0.0.20030929-1+deb7u2) [security]

pairwise sequence alignments

netcdf-bin (1:4.1.3-6+b1 [amd64, i386, kfreebsd-amd64, kfreebsd-i386], 1:4.1.3-6 [armel, armhf, ia64, mips, mipsel, powerpc, s390, s390x, sparc])

NetCDF ファイル読み書き用プログラム

nexus-tools (4.2.1-svn1614-1+b2 [amd64, armel, armhf, i386, ia64, mipsel, powerpc, s390, sparc], 4.2.1-svn1614-1+b1 [s390x])

NeXus scientific data file format - applications

njplot (2.4-1)

phylogenetic tree drawing program

numdiff (5.6.0-1)

Compare similar files with numeric fields.

nwchem (6.1-6)

High-performance computational chemistry software

nwchem-data (6.1-6)

High-performance computational chemistry software (data files)

oar-admin (2.5.2-3+deb7u1)

OAR batch scheduler administration tools package

oar-api (2.5.2-3+deb7u1)

移行用ダミーパッケージ

oar-common (2.5.2-3+deb7u1)

OAR batch scheduler common package

oar-node (2.5.2-3+deb7u1)

OAR batch scheduler node package

oar-restful-api (2.5.2-3+deb7u1)

OAR RESTful API

oar-server (2.5.2-3+deb7u1)

OAR batch scheduler server package

oar-server-mysql (2.5.2-3+deb7u1)

OAR batch scheduler MySQL server backend package

oar-server-pgsql (2.5.2-3+deb7u1)

OAR batch scheduler PostgreSQL server backend package

oar-user (2.5.2-3+deb7u1)

OAR batch scheduler user package

oar-user-mysql (2.5.2-3+deb7u1)

OAR batch scheduler MySQL user backend package

oar-user-pgsql (2.5.2-3+deb7u1)

OAR batch scheduler PostgreSQL user backend package

oar-web-status (2.5.2-3+deb7u1)

OAR batch scheduler visualization tool package

oasis3 (3.3.beta.dfsg.1-8+b1)

Coupler for exchanging fields between components of Earth system models

oasis3-examples (3.3.beta.dfsg.1-8+b1)

Example models for the OASIS climate model coupler

obdgpslogger (0.16-1.2)

suite of tools to log OBDII and GPS data

objcryst-fox (1.9.6.0-2)

Free Objects for Xtallography

oce-draw (0.9.1-3)

OpenCASCADE Community Edition CAE platform shared library

octave-biosig (1.3.0-2)

Octave bindings for BioSig library

octave-gdf (0.1.2-2)

IO library for the GDF -- Octave interface

octave-lhapdf (5.8.7+repack-1)

Octave Bindings for LHAPDF

octave-psychtoolbox-3 (3.0.9+svn2579.dfsg1-1)

toolbox for vision research -- Octave bindings

odin (1.8.5-2)

develop, simulate and run magnetic resonance sequences

ogdi-bin (3.2.0~beta2-7)

Open Geographic Datastore Interface Library -- utilities

openbabel (2.3.1+dfsg-4)

Chemical toolbox utilities (cli)

openbabel-gui (2.3.1+dfsg-4)

Chemical toolbox utilities (graphical user interface)

openmeeg-tools (2.0.0.dfsg-5)

openmeeg library -- command line tools

openmx (3.5-1)

Package for nano-scale material simulations

openrocket (12.03-1+deb7u1) [security]

Model Rocket Simulator

openturns-examples (1.0-4)

examples of OpenTURNS functionalities

openturns-validation (1.0-4)

validation files for OpenTURNS

openuniverse (1.0beta3.1+dfsg-3)

3D 表示の宇宙シミュレータ

openuniverse-common (1.0beta3.1+dfsg-3)

3D 宇宙シミュレータ データファイル

openwalnut-modules (1.2.5-1.1+b1 [amd64, armel, armhf, i386, ia64, kfreebsd-amd64, kfreebsd-i386, mips, mipsel, powerpc, s390, s390x], 1.2.5-1.1 [sparc])

Multi-modal medical and brain data visualization tool.

openwalnut-qt4 (1.2.5-1.1+b1 [amd64, armel, armhf, i386, ia64, kfreebsd-amd64, kfreebsd-i386, mips, mipsel, powerpc, s390, s390x], 1.2.5-1.1 [sparc])

Multi-modal medical and brain data visualization tool.

opj2dat (20080225-2.1)

データファイル変換ツール用 OriginLab Origin プロジェクトファイル

optgeo (2.11-3)

simulator for geometrical optics

opticalraytracer (3.2-1.1)

Virtual lens design workshop

origami (0.7.4-1)

command-line management tool for Folding @ Home clients

ossim-core (1.7.21-4)

The OSSIM core utilities

otf-trace (1.10.2+dfsg-2)

Open Trace Format support library - development files

ovito (0.9.5-2)

visualization and analysis tool for atomistic simulation data

paje.app (1.98-1+b1 [amd64, i386, kfreebsd-amd64, kfreebsd-i386], 1.98-1 [armel, armhf, ia64, mips, mipsel, powerpc, s390, s390x, sparc])

汎用可視化ツール (ガントチャートなど)

paml (4.5-1) [non-free]

Phylogenetic Analysis by Maximum Likelihood (PAML)

paraview (3.14.1-6)

並行可視化アプリケーション

paw (1:2.14.04.dfsg.2-8)

物理解析ワークステーション - グラフィカルな解析プログラム

paw++ (1:2.14.04.dfsg.2-8)

物理分析ワークステーション (Lesstif による強化版)

paw-common (1:2.14.04.dfsg.2-8)

Physics Analysis Workstation (common files)

paw-demos (1:2.14.04.dfsg.2-8)

物理分析ワークステーションのサンプルおよびテストスクリプト

pdb2pqr (1.8-1)

Preparation of protein structures for electrostatics calculations

pegasus-wms (4.0.1+dfsg-8)

Scientific workflow management system for Condor

perlprimer (1.1.21-1)

PCR 用プライマをグラフィカルに設計

phy-spread (1.0.3-1) [non-free]

analyze and visualize phylogeographic reconstructions

phylip (1:3.69-1) [non-free]

package of programs for inferring phylogenies

phyml (2:20110919-1)

Phylogenetic estimation using Maximum Likelihood

picard-tools (1.46-1)

Command line tools to manipulate SAM and BAM files

picosat (936-4)

proof と core サポート付き SAT ソルバ

planets (0.1.13-13)

Gravitation simulation of planetary bodies

plastimatch (1.5.11+dfsg0-1)

medical image reconstruction and registration

plink (1.07-3)

whole-genome association analysis toolset

poa (2.0+20060928-3)

Partial Order Alignment for multiple sequence alignment

populations (1.2.33+svn0120106-2.1)

population genetic software

pp-popularity-contest (1.0.5-1)

PredictProtein popularity contest

praat (5.3.16-1)

音声分析および音声合成用プログラム

primer3 (2.2.3-1)

DNA 増幅用隣接オリゴヌクレオチド設計ツール

probalign (1.4-2)

multiple sequence alignment using partition function posterior probabilities

probcons (1.12-9)

確率的で整合性に基づく多重配列アライメント

probcons-extra (1.12-9)

probcons パッケージ由来の特別プログラム

proda (1.0-8)

タンパク質配列のマルチプルアライメント

profnet-bval (1.0.21-1+wheezy1)

neural network architecture for profbval

profnet-chop (1.0.21-1+wheezy1)

neural network architecture for profchop

profnet-con (1.0.21-1+wheezy1)

neural network architecture for profcon

profnet-isis (1.0.21-1+wheezy1)

neural network architecture for profisis

profnet-md (1.0.21-1+wheezy1)

neural network architecture for metadisorder

profnet-norsnet (1.0.21-1+wheezy1)

neural network architecture for norsnet

profnet-prof (1.0.21-1+wheezy1)

neural network architecture for profacc

profnet-snapfun (1.0.21-1+wheezy1)

neural network architecture for snapfun

profphd (1.0.39-1)

secondary structure and solvent accessibility predictor

profphd-net (1.0.21-1+wheezy1)

neural network architecture for profphd

profphd-utils (1.0.9-1)

profphd helper utilities convert_seq and filter_hssp

proftmb (1.1.10-1)

per-residue prediction of bacterial transmembrane beta barrels

proj-bin (4.7.0-2)

地図投影ライブラリ（ツール）

psi3 (3.4.0-4)

Quantum Chemical Program Suite

psychopy (1.73.06.dfsg-1)

environment for creating psychology stimuli in Python

psychtoolbox-3-common (3.0.9+svn2579.dfsg1-1)

toolbox for vision research -- arch/interpreter independent part

psychtoolbox-3-lib (3.0.9+svn2579.dfsg1-1)

toolbox for vision research -- arch-specific parts

pyfai (0.3.5-1)

python library for Fast Azimuthal Integration

pyformex (0.8.6-4)

program to create 3D geometry from Python scripts.

pyformex-lib (0.8.6-4)

program to create 3D geometry from Python scripts.

pymca (4.6.0-2)

Python applications and toolkit for X-ray fluorescence analysis

pymca-data (4.6.0-2)

Architecture independent data files for PyMca

pymol (1.5.0.1-2)

Molecular Graphics System

pythia8-data (8.1.65-1)

PYTHIA8 data files

qfits-tools (6.2.0-5)

FITS manipulation tools

qgis (1.7.4+1.7.5~20120320-1.1+b1)

地理情報システム (GIS)

qgis-api-doc (1.7.4+1.7.5~20120320-1.1)

Quantum GIS API documentation

qgis-common (1.7.4+1.7.5~20120320-1.1)

Quantum GIS - architecture-independent data

qgis-mapserver (1.7.4+1.7.5~20120320-1.1+b1)

Quantum GIS mapserver

qgis-plugin-grass (1.7.4+1.7.5~20120320-1.1+b1)

GRASS plugin for Quantum GIS

qgis-plugin-grass-common (1.7.4+1.7.5~20120320-1.1)

GRASS plugin for Quantum GIS - architecture-independent data

qgis-providers (1.7.4+1.7.5~20120320-1.1+b1)

collection of data providers to Quantum GIS

qgis-providers-common (1.7.4+1.7.5~20120320-1.1)

collection of data providers to Quantum GIS - architecture-independent files

qgis-sqlanywhere1.7.5 (1.7.4+1.7.5~20120320-1.1+b1)

Quantum GIS sql anywhere plugin and provider

qiime (1.4.0-2)

Quantitative Insights Into Microbial Ecology

qmc (0.94-3+b1 [i386, ia64, mips, mipsel, powerpc, s390, sparc], 0.94-3 [amd64, armel, armhf, kfreebsd-amd64, kfreebsd-i386, s390x])

Quine McClusky 単純化ツール

qthid-fcd-controller (3.1-5)

Funcube Dongle controller

quantum-espresso (5.0-1)

電子構造および第一原理分子動力学スイート

quantum-espresso-data (5.0-1)

Electronic-Structure and Ab-Initio Molecular Dynamics Suite (Documentation)

qutemol (0.4.1~cvs20081111-2+b2 [amd64, armel, armhf, i386, ia64, kfreebsd-amd64, kfreebsd-i386, mips, powerpc, s390, s390x, sparc], 0.4.1~cvs20081111-2+b1 [mipsel])

interactive visualization of macromolecules

raccoon (1.0-1) [contrib]

preparation of in silico drug screening projects

rasmol (2.7.5.2-1)

生化学の高分子を可視化

raster3d (3.0-2-4)

tools for generating images of proteins or other molecules

raxml (7.2.8-2)

Randomized Axelerated Maximum Likelihood of phylogenetic trees

rdkit-data (201203-3)

Collection of cheminformatics and machine-learning software (data files)

readseq (1-9)

Conversion between sequence formats

reprof (1.0.1-1)

protein secondary structure and accessibility predictor

rivet (1.8.0-1)

Robust Independent Validation of Experiment and Theory

rivet-plugins (1.8.0-1)

Analysis plugins of Rivet

rivet-plugins-data (1.8.0-1)

Data files of Rivet analysis plugins

rivet-plugins-dev (1.8.0-1)

Template generator of Rivet analysis plugin

rivet-root-converter (1.8.0-1)

Rivet and ROOT file format converter

rnahybrid (2.1.1-1)

Fast and effective prediction of microRNA/target duplexes

robot-player (3.0.2+dfsg-4+b1)

Networked server for robots and sensors

robot-player-dev (3.0.2+dfsg-4)

Networked server for robots and sensors - development package

root-plugin-geom-gdml (5.34.00-2)

GDML import/export module for ROOT geometries

root-plugin-geom-geombuilder (5.34.00-2)

Geometry builder plugin for ROOT

root-plugin-geom-geompainter (5.34.00-2)

Geometry painter plugin for ROOT

root-plugin-graf2d-asimage (5.34.00-2)

AfterImage plugin for ROOT

root-plugin-graf2d-qt (5.34.00-2)

Graf2d Qt plugin for ROOT

root-plugin-graf2d-x11 (5.34.00-2)

X window system plugin for ROOT

root-plugin-graf3d-x3d (5.34.00-2)

X 3D plugin for ROOT

root-plugin-gui-fitpanel (5.34.00-2)

GUI element for fits plugin for ROOT

root-plugin-gui-guibuilder (5.34.00-2)

GUI editor plug-in for ROOT

root-plugin-gui-qt (5.34.00-2)

Qt plugin for ROOT

root-plugin-gui-sessionviewer (5.34.00-2)

GUI to browse an interactive PROOF session

root-plugin-hist-hbook (5.34.00-2)

Hbook plugin for ROOT

root-plugin-hist-histpainter (5.34.00-2)

Histogram painter plugin for ROOT

root-plugin-hist-spectrumpainter (5.34.00-2)

Spectrum painter plugin for ROOT

root-plugin-io-sql (5.34.00-2)

SQL plugin for ROOT

root-plugin-io-xml (5.34.00-2)

XML reader plugin for ROOT

root-plugin-math-fftw3 (5.34.00-2)

FFTw plugin for ROOT

root-plugin-math-fumili (5.34.00-2)

Fumili plugin for ROOT

root-plugin-math-minuit2 (5.34.00-2)

Minuit version 2 plugin for ROOT

root-plugin-montecarlo-pythia8 (5.34.00-2)

Pythia version 8 plugin for ROOT

root-plugin-net-globus (5.34.00-2)

Globus plugin for ROOT

root-plugin-net-krb5 (5.34.00-2)

Kerberos (version 5) plugin for ROOT

root-plugin-proof-peac (5.34.00-2)

PEAC plugin for ROOT - run-time libraries

root-plugin-sql-mysql (5.34.00-2)

MySQL client plugin for ROOT

root-plugin-sql-odbc (5.34.00-2)

ODBC plugin for ROOT

root-plugin-sql-pgsql (5.34.00-2)

PostgreSQL client plugin for ROOT

root-plugin-tree-treeviewer (5.34.00-2)

GUI to browse a ROOT tree

root-system (5.34.00-2)

metapackage to install all ROOT packages

root-system-bin (5.34.00-2)

Numerical data analysis framework - general applications

root-system-common (5.34.00-2)

Common files for ROOT

root-system-proofd (5.34.00-2)

Parallel ROOt Facility - distributed, parallel computing

root-system-rootd (5.34.00-2)

ROOT remote file server

saint (2.3.3-1)

Significance Analysis of INTeractome

samtools (0.1.18-1)

processing sequence alignments in SAM and BAM formats

saods9 (7.0.1+dfsg-1)

Image display tool for astronomy

saods9-blt (7.0.1+dfsg-1)

BLT subpackage for saods9

saods9-data (7.0.1+dfsg-1)

Image display tool for astronomy (shared data)

sat4j (2.3.1-1)

効率的な SAT ソルバー ライブラリ Java 版

savi (1.4.5-4)

satellite constellation visualisation

science-astronomy (1.0)

Debian Science 天文学パッケージ

science-astronomy-dev (1.0)

Debian Science Astronomy-dev packages

science-biology (1.0)

Debian Science Biology packages

science-chemistry (1.0)

Debian Science Chemistry packages

science-config (1.0)

Debian Science Project config package

science-dataacquisition (1.0)

Debian Science data acquisition packages

science-dataacquisition-dev (1.0)

Debian Science data acquisition development packages

science-distributedcomputing (1.0)

Debian Science Distributed Computing packages

science-electronics (1.0)

Debian Science 電子工学パッケージ

science-electrophysiology (1.0)

Debian Science packages for Electrophysiology

science-engineering (1.0)

Debian Science Engineering packages

science-engineering-dev (1.0)

Debian Science Engineering-dev packages

science-geography (1.0)

Debian Science 地理学パッケージ

science-highenergy-physics (1.0)

Debian Science High Energy Physics packages

science-highenergy-physics-dev (1.0)

Debian Science High Energy Physics development packages

science-imageanalysis (1.0)

Debian Science image analysis packages

science-linguistics (1.0)

Debian Science Linguistics packages

science-machine-learning (1.0)

Debian Science Machine Learning packages

science-mathematics (1.0)

Debian Science 数学パッケージ

science-mathematics-dev (1.0)

Debian Science Mathematics-dev packages

science-meteorology (1.0)

Debian Science Meteorology packages

science-meteorology-dev (1.0)

Debian Science Meteorology-dev packages

science-nanoscale-physics (1.0)

Debian Science Nanoscale Physics packages

science-nanoscale-physics-dev (1.0)

Debian Science Nanoscale Physics development packages

science-neuroscience-cognitive (1.0)

Debian Science packages for Cognitive Neuroscience

science-neuroscience-modeling (1.0)

Debian Science packages for modeling of neural systems

science-numericalcomputation (1.0)

Debian Science Numerical Computation packages

science-physics (1.0)

Debian Science Physics packages

science-physics-dev (1.0)

Debian Science Physics-dev packages

science-psychophysics (1.0)

Debian Science packages for Psychophysics

science-robotics (1.0)

Debian Robotics packages

science-simulations (1.0)

Debian Science Simulation packages

science-statistics (1.0)

Debian Science 統計学パッケージ

science-tasks (1.0)

Debian Science tasks for tasksel

science-typesetting (1.0)

Debian Science typesetting packages

science-viewing (1.0)

Debian Science data visualisation packages

seaview (1:4.3.3-3) [non-free]

Multiplatform interface for sequence alignment and phylogeny

seesat5 (0.90.10-1.1)

衛星位置検出プログラム

seq-gen (1.3.3-1) [non-free]

simulate the evolution of nucleotide or amino acid sequences

seqan-apps (1.3.1-1)

C++ library for the analysis of biological sequences

sextractor (2.8.6+dfsg-1)

Source extractor for astronomical images

shelxle (1.0.564-1)

graphical user interface for SHELXL

sibsim4 (0.20-1)

DNA テンプレート上で expressed RNA 配列を整列

sift (4.0.3b-3) [non-free]

predicts if a substitution in a protein has a phenotypic effect

sigma-align (1.1.3-3)

Simple greedy multiple alignment of non-coding DNA sequences

sigviewer (0.5.1+svn556-1+b2 [amd64, armel, armhf, i386, ia64, kfreebsd-amd64, kfreebsd-i386, mips, mipsel, powerpc, s390, s390x], 0.5.1+svn556-1 [sparc])

GUI viewer for biosignals such as EEG, EMG, and ECG

sim4 (0.0.20030921-3)

cDNA とゲノム DNA の整列用ツール

simgrid (3.7.1-1)

Toolkit for scalable simulation of distributed applications

sixpack (1:0.68-1) [contrib]

full-featured package for XAS analysis

slang-xfig (0.2.0~.35-1.1)

produce plots and drawings through Xfig's fig2dev in S-Lang

spass (3.7-3)

An automated theorem prover for first-order logic with equality

spatialite-bin (3.0.0~beta20110817-3+deb7u1)

SQLite 向け空間データ拡張 - ツール

spd (1.3.0-1)

Synchrotron image corrections and azimuthal integration

squizz (0.99a-2)

Converter for genetic sequences and alignments

sra-toolkit (2.1.7a-1)

utilities for the NCBI Sequence Read Archive

sra-toolkit-libs-dev (2.1.7a-1)

Development files for the NCBI SRA Toolkit's libraries

sra-toolkit-libs0 (2.1.7a-1)

Libraries for the SRA Toolkit

ssake (3.8-2)

genomics application for assembling millions of very short DNA sequences

ssake-examples (3.8-2)

example data for SSAKE, a genomic assembler of short reads

staden-io-lib-utils (1.12.4-1)

programs for maniuplating DNA sequencing files

stardata-common (0.8)

Common framework to manage astronomy packages

starplot (0.95.5-4)

三次元視野を持った星図ビューア

starpu-contrib-examples (1.0.1+dfsg-1) [contrib]

Task scheduler for heterogeneous multicore machines - exs

starpu-examples (1.0.1+dfsg-1)

Task scheduler for heterogeneous multicore machines - exs

starpu-examples

以下のパッケージによって提供される仮想パッケージです: starpu-contrib-examples

stellarium (0.11.3-1+deb7u1+b1 [amd64], 0.11.3-1+deb7u1 [armel, armhf, i386, ia64, kfreebsd-amd64, kfreebsd-i386, mips, mipsel, powerpc, s390, s390x, sparc])

リアルタイムで写実的な天空生成プログラム

stellarium-data (0.11.3-1+deb7u1)

Stellarium data files

step (4:4.8.4-1)

interactive physical simulator for KDE

stimfit (0.10.18-1.1+b1)

A program for viewing and analyzing electrophysiological data

sumo (0.15.0~dfsg-2)

Simulation of Urban MObility (SUMO)

survex (1.2.6-4)

cave surveying and mapping software

survex-aven (1.2.6-4)

sophisticated cave survey viewer for Survex

survex-svxedit (1.2.6-4)

survey data editor for Survex

swe-basic-data (1.77.00.0005-2)

basic data files for the libswe package

swe-standard-data (00004-1)

standard data for the Swiss Ephemeris

syrthes (3.4.3-dfsg1-6)

Transient thermal simulations in complex solid geometries

t-coffee (9.02.r1228-2)

多重配列アライメント

t-coffee-examples (9.02.r1228-2)

annotated examples for the use of T-Coffee

tabix (0.2.6-1)

generic indexer for TAB-delimited genome position files

tcd-utils (20061127-2)

convert Tide Constituent Database (TCD) files

terraintool (1.12a-1)

Generates survex format terrain models from SRTM and ASTER data

tessa (0.3.1-6+b1 [amd64, armhf, i386, ia64, kfreebsd-amd64, kfreebsd-i386, mips, mipsel, powerpc, s390, s390x, sparc], 0.3.1-6 [armel])

FDTD 法を使った三次元光学システムシミュレータ

tessa-mpi (0.3.1-6+b1 [amd64, armhf, i386, ia64, kfreebsd-amd64, kfreebsd-i386, mips, mipsel, powerpc, s390, s390x, sparc], 0.3.1-6 [armel])

simulation of 3D optical systems using FDTD on MPI clusters

thepeg (1.8.0-1)

Toolkit for High Energy Physics Event Generation

thepeg-gui (1.8.0-1)

Java GUI of ThePEG

thepeg-reference (1.8.0-1)

Code reference of ThePEG

therion (5.3.9-4)

Cave surveying - 2D and 3D drawing software

therion-viewer (5.3.9-4)

Cave surveying - 3D viewer for therion models

theseus (1.6.2-2)

superimpose macromolecules using maximum likelihood

tigr-glimmer (3.02-2)

古細菌やバクテリアから遺伝子を発見

timbl (6.4.2-1)

Tilburg Memory Based Learner

timblserver (1.4-2)

Server extensions for Timbl

tm-align (20120507-1)

structual alignment of proteins

transcalc (0.14-5)

microwave and RF transmission line calculator

transtermhp (2.09-1)

find rho-independent transcription terminators in bacterial genomes

tree-ppuzzle (5.2-7)

最尤法による系統樹の再構築 (並列化版)

tree-puzzle (5.2-7)

最尤法による系統樹の再構築

treeviewx (0.5.1+20100823-1)

Displays and prints phylogenetic trees

triangle-bin (1.6-2) [non-free]

High-quality 2-D mesh generator binary programs

tunnelx (20110801-2.1+deb7u1) [security]

Cave Survey drawing software

twms (0.03e-2)

tiny web map service

ucto (0.5.2-2)

Unicode Tokenizer

udav (0.7.1.2-3+b1)

MathGL に基づくデータ可視化のためのアプリケーション

uhd-host (3.4.2-1)

universal hardware driver for Ettus Research products

units-filter (3.5-2)

物理的な値に関する表現用パーサ

urg-utils (0.8.12-4)

utilities for Hokuyo URG/UTM laser range scanners

v-sim (3.6.0-2+b3 [armel, ia64, kfreebsd-amd64, kfreebsd-i386, powerpc, s390], 3.6.0-2+b2 [amd64, i386, mips, mipsel, sparc], 3.6.0-2+b1 [armhf], 3.6.0-2 [s390x])

原子構造の可視化

v-sim-common (3.6.0-2)

Visualize atomic structures (support files)

v-sim-plugins (3.6.0-2+b3 [armel, ia64, kfreebsd-amd64, kfreebsd-i386, powerpc, s390], 3.6.0-2+b2 [amd64, i386, mips, mipsel, sparc], 3.6.0-2+b1 [armhf], 3.6.0-2 [s390x])

Plugins for V_Sim (a 3D visualization package)

vcftools (0.1.9-1)

designed for working with VCF files

velvet (1.2.03~nozlibcopy-1)

非常に短いリード用塩基配列アセンブラ

velvet-example (1.2.03~nozlibcopy-1)

Example data for the Velvet sequence assembler

veusz (1.15-1)

2D scientific plotting application with graphical interface

veusz-helpers (1.15-1+b1 [amd64], 1.15-1 [armel, armhf, i386, ia64, kfreebsd-amd64, kfreebsd-i386, mips, mipsel, powerpc, s390, s390x, sparc])

Architecture-specific helper module for Veusz

via-bin (2.0.4-2)

tools for volumetric image analysis

viewmol (2.4.1-18)

計算化学プログラム用のグラフィカルなフロントエンド

vistrails (2.0.alpha~1-3)

Science visualisation workflow toolkit

vmtk (1.0.1-1) [non-free]

the Vascular Modeling Toolkit

volview (3.4-3)

Advanced volume visualization tool

vowpal-wabbit (6.1-1)

高速でスケーラブルなオンライン機械学習アルゴリズム

voxbo (1.8.5~svn1246-1+b1)

processing, statistical analysis, and display of brain imaging data

wcslib-tools (4.13.4-1)

Command line tools utilizing wcslib

wcstools (3.8.5-1)

Handle the WCS of a FITS image

weka (3.6.6-1)

データマイニング作業用機械学習アルゴリズム集

wise (2.4.1-10)

生体高分子の比較、 一般に DNA 配列とタンパク質配列

worldwind (0.5.0-10) [non-free]

3D Virtual Globe

xbs (0-8)

分子の三次元モデルとムービー

xcrysden (1.5.53-1)

Crystalline and Molecular Structure Visualizer

xcrysden-data (1.5.53-1)

Crystalline and Molecular Structure Visualizer (Data Files)

xdrawchem (2.0-2)

化学構造および化学反応エディタ

xflr5 (6.07+svn513-1)

analysis tool for airfoils

xfoil (6.97.dfsg-5)

亜音速翼型の設計・解析プログラム

xmakemol (5.16-6)

program for visualizing atomic and molecular systems

xmakemol-gl (5.16-6)

program for visualizing atomic and molecular systems (OpenGL)

xmds (1.6.6-7)

拡張可能な高次方程式シミュレータ

xpa-tools (2.1.14-2)

Tools for seamless communication between Unix programs

xplot (1.19-9+b1 [powerpc, s390], 1.19-9 [amd64, armel, armhf, i386, ia64, kfreebsd-amd64, kfreebsd-i386, mips, mipsel, s390x, sparc])

画面に表示するシンプルな x-y 列データプロッタ

xplot-xplot.org (0.90.7.1-2)

大量のデータをグラフ化・可視化するための高速なツール

xppaut (6.11b+1.dfsg-1)

Phase Plane Plus Auto: 多種の方程式を解く

xtide (2.11-1)

潮の満ち引きと最新の予報を表示

xtide-coastline (20020202-1)

coastline data for xtide

xtide-data (20100529-1)

Harmonics data for xtide

xtide-data-nonfree (20100529-1) [non-free]

Harmonics data for xtide (Canada, Netherlands, Germany and UK)

xyscan (3.31-3)

data thief for scientists

yade (0.80.1-2)

離散要素モデリングのためのプラットフォーム

yale (5.0.95-2) [non-free]

stellar data set from the Yale Bright Star Catalog

ygraph (0.16~cvs20090218-1.1+b1)

plot and animate data sets

yorick (2.2.02+dfsg-6)

interpreted language and scientific graphics

yorick-av (0.0.1-2)

write movies from Yorick in various formats

yorick-cubeview (1.6-2)

3D FITS data viewer specialized in spectro-imaging

yorick-curses (0.1-6)

interface to the (n)curses library for the Yorick language

yorick-data (2.2.02+dfsg-6)

interpreted library for the Yorick language

yorick-dev (2.2.02+dfsg-6)

development files for the Yorick interpreted language

yorick-full (2.2.02+dfsg-6)

full installation of the Yorick interpreter and add-ons

yorick-gl (1.1+cvs20070922+dfsg-6)

OpenGL 3D graphics support for the Yorick language

yorick-gyoto (0.0.3-5)

General relativistic geodesic integration for the Yorick language

yorick-hdf5 (0.8.0-4)

Hierarchical Data Format 5 interface for the Yorick language

yorick-imutil (0.5.7-3)

fast image manipulation routines for the Yorick language

yorick-mira (0.9.10+dfsg-1)

optical interferometry image reconstruction within Yorick

yorick-ml4 (0.6.0-3)

Matlab file format support for the Yorick language

yorick-mpeg (0.1-2)

MPEG output support for the Yorick language

yorick-mpy-common (2.2.02+dfsg-6)

Message Passing Yorick (common files)

yorick-mpy-mpich2 (2.2.02+dfsg-6)

Message Passing Yorick (MPICH2 build)

yorick-mpy-openmpi (2.2.02+dfsg-6)

Message Passing Yorick (OpenMPI build)

yorick-optimpack (1.3.2+dfsg-1)

optimization of large scale problems for the Yorick language

yorick-soy (1.4.0-3)

sparse matrix operations for the Yorick language

yorick-spydr (0.8.2-3)

FITS image display and simple analysis

yorick-svipc (0.14-2)

interprocess communication (shared memory...) for Yorick

yorick-yao (4.9.1-2)

Yorick-based adaptive optics system simulator

yorick-yeti (6.3.2-3)

utility plugin for the Yorick language

yorick-yeti-fftw (6.3.2-3)

FFT plugin for the Yorick language

yorick-yeti-gsl (6.3.2-3)

GSL special functions plugin for the Yorick language

yorick-yeti-regex (6.3.2-3)

POSIX regular expressions for the Yorick language

yorick-yeti-tiff (6.3.2-3)

TIFF image format input for the Yorick language

yorick-yutils (1.5.2-1)

various utilities for the Yorick language

yorick-z (1.2.0+cvs20080115-5)

zlib, jpeg and png support for the Yorick language

z88 (13.0.0+dfsg2-3)

有限要素解析プログラム - ランタイム

z88-data (13.0.0+dfsg2-3)

Finite Element Analysis Program - data

zimpl (3.2.0+dfsg-2)

最適化問題向けの数学モデル化言語