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[ Source: autodocksuite  ]

Package: autodock (4.2.3-2)

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analysis of ligand binding to protein structure

AutoDock is a prime representative of the programs addressing the simulation of the docking of fairly small chemical ligands to rather big protein receptors. Earlier versions had all flexibility in the ligands while the protein was kept rather ridgid. This latest version 4 also allows for a flexibility of selected sidechains of surface residues, i.e., takes the rotamers into account.

The AutoDock program performs the docking of the ligand to a set of grids describing the target protein. AutoGrid pre-calculates these grids.

Tags: Field: Biology, Structural Biology, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, works-with-format::TODO, Works with: 3D Model, Need an extra tag

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Download for all available architectures
Architecture Package Size Installed Size Files
amd64 182.0 kB464.0 kB [list of files]
armel 183.3 kB436.0 kB [list of files]
armhf 164.5 kB324.0 kB [list of files]
i386 164.6 kB448.0 kB [list of files]
ia64 283.0 kB960.0 kB [list of files]
kfreebsd-amd64 182.1 kB458.0 kB [list of files]
kfreebsd-i386 165.3 kB442.0 kB [list of files]
mips 185.0 kB476.0 kB [list of files]
mipsel 186.3 kB476.0 kB [list of files]
powerpc 186.0 kB436.0 kB [list of files]
s390 171.0 kB424.0 kB [list of files]
s390x 181.7 kB438.0 kB [list of files]
sparc 189.5 kB456.0 kB [list of files]