[ ソース: libvcflib ]
パッケージ: libvcflib-tools (1.0.9+dfsg1-3)
libvcflib-tools に関するリンク
Debian の資源:
libvcflib ソースパッケージをダウンロード:
- [libvcflib_1.0.9+dfsg1-3.dsc]
- [libvcflib_1.0.9+dfsg1.orig.tar.xz]
- [libvcflib_1.0.9+dfsg1-3.debian.tar.xz]
メンテナ:
外部の資源:
- ホームページ [github.com]
類似のパッケージ:
C++ library for parsing and manipulating VCF files (tools)
The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed variations between individuals. VCF provides a common interchange format for the description of variation in individuals and populations of samples, and has become the defacto standard reporting format for a wide array of genomic variant detectors.
vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. It is both:
* an API for parsing and operating on records of genomic variation as it can be described by the VCF format, * and a collection of command-line utilities for executing complex manipulations on VCF files.
This package contains several tools using the library.
その他の libvcflib-tools 関連パッケージ
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- dep: libc6 (>= 2.34)
- GNU C ライブラリ: 共有ライブラリ
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
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- dep: libdisorder0 (>= 0.0.2)
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- dep: libfastahack0 (>= 0.0+git20160702.bbc645f)
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- dep: libgcc-s1 (>= 3.3.1) [ppc64el 以外]
- GCC 共有ライブラリ
- dep: libgcc-s1 (>= 3.4.4) [ppc64el]
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- dep: libgomp1 (>= 4.2.1)
- GCC OpenMP (GOMP) サポートライブラリ
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- dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)
- determine similar regions between two strings or genomic sequences (lib)
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- dep: libstdc++6 (>= 13.1)
- GNU 標準 C++ ライブラリ v3
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- dep: libtabixpp0 (>= 1.0.0)
- C++ wrapper to tabix indexer
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- dep: libvcflib2 (>= 1.0.9+dfsg1)
- C++ library for parsing and manipulating VCF files
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- dep: libwfa2-0 (>= 2.3.3)
- exact gap-affine algorithm (shared library)
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- dep: python3
- 対話式の高レベルオブジェクト指向言語 (デフォルト python3 バージョン)
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- dep: r-base-core
- GNU R core of statistical computation and graphics system
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- dep: r-cran-ggplot2
- implementation of the Grammar of Graphics
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- dep: r-cran-gridbase
- GNU R Integration of base and grid graphics
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- dep: r-cran-plyr
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- sug: r-cran-pracma
- practical numerical math functions for GNU R