[ ソース: qcat ]
パッケージ: qcat (1.1.0-6)
demultiplexing Oxford Nanopore reads from FASTQ files
Qcat is a command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files. It accepts basecalled FASTQ files and splits the reads into separate FASTQ files based on their barcode. Qcat makes the demultiplexing algorithms used in albacore/guppy and EPI2ME available to be used locally with FASTQ files. Currently qcat implements the EPI2ME algorithm.
その他の qcat 関連パッケージ
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- dep: python3
- 対話式の高レベルオブジェクト指向言語 (デフォルト python3 バージョン)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-parasail
- Python3 bindings for the parasail C library
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- dep: python3-six
- Python 2 and 3 compatibility library
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- dep: python3-yaml
- YAML parser and emitter for Python3
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- sug: qcat-examples
- demultiplexing Oxford Nanopore reads from FASTQ files (examples)