[ ソース: python-pyfaidx ]
パッケージ: python-pyfaidx-examples (0.8.1.1-1)
python-pyfaidx-examples に関するリンク
Debian の資源:
python-pyfaidx ソースパッケージをダウンロード:
- [python-pyfaidx_0.8.1.1-1.dsc]
- [python-pyfaidx_0.8.1.1.orig.tar.gz]
- [python-pyfaidx_0.8.1.1-1.debian.tar.xz]
メンテナ:
外部の資源:
- ホームページ [github.com]
類似のパッケージ:
example data for efficient random access to fasta subsequences for Python
Samtools provides a function "faidx" (FAsta InDeX), which creates a small flat index file ".fai" allowing for fast random access to any subsequence in the indexed FASTA file, while loading a minimal amount of the file in to memory. This Python module implements pure Python classes for indexing, retrieval, and in-place modification of FASTA files using a samtools compatible index. The pyfaidx module is API compatible with the pygr seqdb module. A command-line script "faidx" is installed alongside the pyfaidx module, and facilitates complex manipulation of FASTA files without any programming knowledge.
This package provides example data to test the Python modules.
その他の python-pyfaidx-examples 関連パッケージ
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- sug: python3-pyfaidx
- efficient random access to fasta subsequences for Python 3