[ ソース: sniffles ]
パッケージ: sniffles (2.2-1)
structural variation caller using third-generation sequencing
Sniffles is a structural variation (SV) caller using third-generation sequencing data such as those from Pacific Biosciences or Oxford Nanopore platforms. It detects all types of SVs using evidence from split-read alignments, high-mismatch regions, and coverage analysis.
その他の sniffles 関連パッケージ
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- dep: python3
- 対話式の高レベルオブジェクト指向言語 (デフォルト python3 バージョン)
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- sug: bwa
- Burrows-Wheeler Aligner