パッケージ: python-cogent (1.9-11 など) [debports]
python-cogent に関するリンク
Debian の資源:
ソースパッケージをダウンロード:
見つかりませんメンテナ:
外部の資源:
- ホームページ [pycogent.org]
類似のパッケージ:
framework for genomic biology
PyCogent is a software library for genomic biology. It is a fully integrated and thoroughly tested framework for:
* controlling third-party applications, * devising workflows; querying databases, * conducting novel probabilistic analyses of biological sequence evolution, and * generating publication quality graphics.It is distinguished by many unique built-in capabilities (such as true codon alignment) and the frequent addition of entirely new methods for the analysis of genomic data.
python-cogent を提供するパッケージ
- python3-cogent3
- framework for genomic biology
その他の python-cogent 関連パッケージ
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- dep: libc6 (>= 2.3.4)
- GNU C ライブラリ: 共有ライブラリ
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
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- dep: python
- パッケージは利用できません
- dep: python (<< 2.8)
- dep: python (>= 2.7~)
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- dep: python-matplotlib
- パッケージは利用できません
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- dep: python-numpy (>= 1:1.13.1)
- パッケージは利用できません
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- dep: python-numpy-abi9
- パッケージは利用できません
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- rec: blast2
- パッケージは利用できません
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- rec: cd-hit
- suite of programs designed to quickly group sequences
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- rec: clearcut
- extremely efficient phylogenetic tree reconstruction
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- rec: dialign
- Segment-based multiple sequence alignment
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- rec: muscle
- Multiple alignment program of protein sequences
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- sug: cdbfasta
- Constant DataBase indexing and retrieval tools for multi-FASTA files
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- sug: clustalw
- global multiple nucleotide or peptide sequence alignment
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- sug: fasttree
- phylogenetic trees from alignments of nucleotide or protein sequences
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- sug: mafft
- Multiple alignment program for amino acid or nucleotide sequences
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- sug: mothur
- 微生物の研究のための配列解析スイート
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- sug: parsinsert
- Parsimonious Insertion of unclassified sequences into phylogenetic trees
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- sug: python-cogent-doc
- docs for python3-cogent3
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- sug: rdp-classifier
- extensible sequence classifier for fungal lsu, bacterial and archaeal 16s
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- sug: rtax
- Classification of sequence reads of 16S ribosomal RNA gene