Package: kalign (1:3.4.0-1)

[ Source: kalign  ]

allineamenti multipli di sequenza globali e progressivi

Kalign è uno strumento a riga di comando per fare allineamenti multipli di sequenze biologiche. Usa l'algoritmo per corrispondenze di stringhe Muth-Manber per migliorare sia l'accuratezza che la velocità dell'allineamento. Usa un approccio globale, progressivo per l'allineamento, arricchito dall'uso di un algoritmo per corrispondenze approssimate di stringhe per calcolare le distanze tra le sequenze e incorporando corrispondenze locali nell'allineamento globale.

Tags: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

Other Packages Related to kalign

• dep: libc6 (>= 2.34) [not alpha, ia64, sh4]

  Libreria C GNU: librerie condivise
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  Libreria C GNU: librerie condivise
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgomp1 (>= 4.9)

  libreria di supporto GOMP (GCC OpenMP)

• enh: bioperl-run

  wrapper BioPerl: script

• enh: t-coffee

  allineamento di sequenze multiple

Download kalign

Download for all available architectures

Architecture	Package Size	Installed Size	Files
alpha (unofficial port)	85.7 kB	408.0 kB	[list of files]
amd64	134.4 kB	1,126.0 kB	[list of files]
arm64	83.7 kB	406.0 kB	[list of files]
armel	79.2 kB	304.0 kB	[list of files]
armhf	76.9 kB	244.0 kB	[list of files]
hppa (unofficial port)	83.3 kB	323.0 kB	[list of files]
i386	88.1 kB	340.0 kB	[list of files]
ia64 (unofficial port)	105.1 kB	557.0 kB	[list of files]
m68k (unofficial port)	80.4 kB	292.0 kB	[list of files]
mips64el	82.0 kB	420.0 kB	[list of files]
ppc64 (unofficial port)	91.3 kB	470.0 kB	[list of files]
ppc64el	99.4 kB	470.0 kB	[list of files]
riscv64	88.3 kB	286.0 kB	[list of files]
s390x	96.2 kB	370.0 kB	[list of files]
sh4 (unofficial port)	88.4 kB	277.0 kB	[list of files]
sparc64 (unofficial port)	75.2 kB	2,137.0 kB	[list of files]
x32 (unofficial port)	91.4 kB	328.0 kB	[list of files]