Package: density-fitness (1.0.0-2)

[ Source: density-fitness  ]

Calculates per-residue electron density scores

The program density-fitness calculates electron density metrics, for main- (includes Cβ atom) and side-chain atoms of individual residues.

For this calculation, the program uses the structure model in either PDB or mmCIF format and the electron density from the 2mFo-DFc and mFo-DFc maps. If these maps are not readily available, the MTZ file and model can be used to calculate maps clipper. Density-fitness support both X-ray and electron diffraction data.

This program is essentially a reimplementation of edstats, a program available from the CCP4 suite. However, the output now contains only the RSR, SRSR and RSCC fields as in edstats with the addition of EDIAm and OPIA and no longer requires pre-calculated map coefficients.

Other Packages Related to density-fitness

• dep: libboost-iostreams1.74.0 (>= 1.74.0)

  libreria Boost.Iostreams

• dep: libboost-program-options1.74.0 (>= 1.74.0)

  libreria per opzioni di programma per C++

• dep: libc6 (>= 2.14) [amd64]

  Libreria C GNU: librerie condivise
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [not amd64, arm64, ppc64el]

• dep: libcifpp1 (>= 1.0.1)

  file di libreria per libcifpp

• dep: libclipper2 (>= 2.1.20201109)

  libreria orientata agli oggetti per calcoli cristallografici

• dep: libgcc-s1 (>= 3.0) [not armel, armhf]

  libreria di supporto a GCC

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libpdb-redo1 (>= 1.0.1) [mips64el, mipsel]

  file di libreria per libpdb-redo

  dep: libpdb-redo1 (>= 1.0.2) [not mips64el, mipsel]

• dep: libstdc++6 (>= 10.2) [armel]

  libreria GNU Standard C++, versione 3

  dep: libstdc++6 (>= 9) [not armel]

• dep: libzeep5 (>= 5.0.2)

  Library file for libzeep

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Architecture	Package Size	Installed Size	Files
amd64	101.7 kB	375.0 kB	[list of files]
arm64	93.6 kB	359.0 kB	[list of files]
armel	85.3 kB	314.0 kB	[list of files]
armhf	86.6 kB	254.0 kB	[list of files]
i386	106.5 kB	361.0 kB	[list of files]
mips64el	95.9 kB	437.0 kB	[list of files]
mipsel	95.2 kB	405.0 kB	[list of files]
ppc64el	105.4 kB	467.0 kB	[list of files]
s390x	92.9 kB	383.0 kB	[list of files]