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[ Source: tigr-glimmer  ]

Package: tigr-glimmer (3.02-2)

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Gene detection in archea and bacteria

Developed by the TIGR institute this software detects coding sequences in bacteria and archea.

Glimmer is a system for finding genes in microbial DNA, especially the genomes of bacteria and archaea. Glimmer (Gene Locator and Interpolated Markov Modeler) uses interpolated Markov models (IMMs) to identify the coding regions and distinguish them from noncoding DNA.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Utility, Purpose: use::searching, works-with-format::TODO, Supports Format: Plain Text, Works with: Need an extra tag

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Download for all available architectures
Architecture Package Size Installed Size Files
amd64 431.3 kB916.0 kB [list of files]
armel 407.1 kB876.0 kB [list of files]
armhf 339.4 kB588.0 kB [list of files]
i386 409.6 kB864.0 kB [list of files]
ia64 575.7 kB1,532.0 kB [list of files]
kfreebsd-amd64 432.6 kB838.0 kB [list of files]
kfreebsd-i386 395.3 kB776.0 kB [list of files]
mips 448.9 kB1,044.0 kB [list of files]
mipsel 451.2 kB1,044.0 kB [list of files]
powerpc 454.4 kB960.0 kB [list of files]
s390 413.4 kB872.0 kB [list of files]
s390x 443.9 kB892.0 kB [list of files]
sparc 422.3 kB892.0 kB [list of files]