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Source Package: circlator (1.5.5-3)

Links for circlator

The following binary packages are built from this source package:

adep: debhelper (>= 12~)

helper programs for debian/rules
adep: dh-python

Debian helper tools for packaging Python libraries and applications
adep: python3-all

package depending on all supported Python 3 runtime versions
adep: python3-setuptools

Python3 Distutils Enhancements
adep: python3-openpyxl

Python 3 module to read/write OpenXML xlsx/xlsm files
adep: python3-jdcal

Julian dates from proleptic Gregorian and Julian calendars
adep: fastaq (>= 3.12.1)

FASTA and FASTQ file manipulation tools
adep: python3-pysam

interface for the SAM/BAM sequence alignment and mapping format (Python 3)
adep: python3-pymummer

Python 3 interface to MUMmer
adep: python3-nose

test discovery and running for Python3 unittest
adep: spades

genome assembler for single-cell and isolates data sets
adep: bwa (>= 0.7.12)

Burrows-Wheeler Aligner
adep: prodigal

Microbial (bacterial and archaeal) gene finding program
adep: canu (<< 1.8+dfsg-1)

single molecule sequence assembler for genomes

or canu (>= 1.8+dfsg-2)

single molecule sequence assembler for genomes

Debian Package Source Repository (VCS: Git): https://salsa.debian.org/med-team/circlator.git
Debian Package Source Repository (Browsable): https://salsa.debian.org/med-team/circlator