Source Package: stacks (2.2+dfsg-1)
Links for stacks
Debian Resources:
- Bug Reports
- Developer Information
- Debian Changelog
- Copyright File
- Debian Source Repository (Git)
- Debian Patch Tracker
Maintainers:
External Resources:
- Homepage [creskolab.uoregon.edu]
The following binary packages are built from this source package:
- stacks
- pipeline for building loci from short-read DNA sequences
- stacks-web
- web interface for displaying loci from short-read sequences
Other Packages Related to stacks
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- adep: debhelper (>= 11~)
- helper programs for debian/rules
-
- adep: python
- interactive high-level object-oriented language (Python2 version)
-
- adep: zlib1g-dev
- compression library - development
-
- adep: libbam-dev
- manipulates nucleotide sequence alignments in BAM or SAM format
-
- adep: libsparsehash-dev (>= 2.0)
- Google's extremely memory-efficient C++ hash_map implementation
-
- adep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
-
- adep: libhts-dev
- development files for the HTSlib
Download stacks
| File | Size (in kB) | MD5 checksum |
|---|---|---|
| stacks_2.2+dfsg-1.dsc | 2.1 kB | cc7eee26c207be14ac74d7c6eccb01ce |
| stacks_2.2+dfsg.orig.tar.xz | 421.7 kB | ad326c64e6207c5863163fb349e15ec3 |
| stacks_2.2+dfsg-1.debian.tar.xz | 8.9 kB | 717da3e1bf79502192639b3ecc0148ee |
- Debian Package Source Repository (VCS: Git)
- https://salsa.debian.org/med-team/stacks.git
- Debian Package Source Repository (Browsable)
- https://salsa.debian.org/med-team/stacks