Package: trinityrnaseq-examples (2.6.6+dfsg-6)
Links for trinityrnaseq-examples
Download Source Package trinityrnaseq:
- Homepage [trinityrnaseq.github.io]
RNA-Seq De novo Assembly common example and testing files
Trinity represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data. Trinity combines three independent software modules: Inchworm, Chrysalis, and Butterfly, applied sequentially to process large volumes of RNA-seq reads. Trinity partitions the sequence data into many individual de Bruijn graphs, each representing the transcriptional complexity at a given gene or locus, and then processes each graph independently to extract full-length splicing isoforms and to tease apart transcripts derived from paralogous genes.
This package contains testing & example files.
Other Packages Related to trinityrnaseq-examples
- dep: coreutils
- GNU core utilities
- dep: perl
- Larry Wall's Practical Extraction and Report Language
- dep: r-base-core
- GNU R core of statistical computation and graphics system
- rec: trinityrnaseq
- RNA-Seq De novo Assembly