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[ Source: microbiomeutil  ]

Package: nast-ier (20101212+dfsg1-2)

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NAST-based DNA alignment tool

The NAST-iEr alignment utility aligns a single raw nucleotide sequence against one or more NAST formatted sequences.

The alignment algorithm involves global dynamic programming profile alignment to fixed (NAST-formatted) multiply aligned template sequences without any end-gap penalty.

NAST-iEr is part of the microbiomeutil suite.

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Download nast-ier

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 20.8 kB100.0 kB [list of files]
amd64 20.4 kB100.0 kB [list of files]
arm64 19.6 kB95.0 kB [list of files]
armel 19.5 kB91.0 kB [list of files]
armhf 19.4 kB91.0 kB [list of files]
hppa (unofficial port) 20.6 kB95.0 kB [list of files]
hurd-i386 20.5 kB95.0 kB [list of files]
i386 20.5 kB99.0 kB [list of files]
kfreebsd-amd64 20.3 kB96.0 kB [list of files]
kfreebsd-i386 20.5 kB95.0 kB [list of files]
m68k (unofficial port) 19.6 kB99.0 kB [list of files]
mips 20.6 kB96.0 kB [list of files]
mips64el 20.9 kB101.0 kB [list of files]
mipsel 20.6 kB96.0 kB [list of files]
powerpcspe (unofficial port) 20.3 kB147.0 kB [list of files]
ppc64 (unofficial port) 20.6 kB148.0 kB [list of files]
ppc64el 20.3 kB147.0 kB [list of files]
riscv64 (unofficial port) 19.7 kB92.0 kB [list of files]
s390x 20.4 kB95.0 kB [list of files]
sh4 (unofficial port) 20.1 kB91.0 kB [list of files]
sparc64 (unofficial port) 19.7 kB100.0 kB [list of files]
x32 (unofficial port) 20.2 kB99.0 kB [list of files]