Package: canu (2.2+dfsg-5)

[ Source: canu  ]

single molecule sequence assembler for genomes

Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION).

Canu is a hierarchical assembly pipeline which runs in four steps:

 * Detect overlaps in high-noise sequences using MHAP
 * Generate corrected sequence consensus
 * Trim corrected sequences
 * Assemble trimmed corrected sequences

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  or gnuplot

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  also a virtual package provided by gnuplot-nox, gnuplot-qt, gnuplot-x11

• dep: libc6 (>= 2.34)

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• dep: libgcc-s1 (>= 4.2)

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• dep: libgomp1 (>= 6)

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• dep: libsnappy1v5 (>= 1.1.10)

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• dep: libstdc++6 (>= 11)

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• dep: mhap

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• dep: perl

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• sug: nanopolish

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Download canu

Download for all available architectures

Architecture	Package Size	Installed Size	Files
arm64	1,272.2 kB	13,789.0 kB	[list of files]