Package: anfo (0.98-9)

[ Source: anfo  ]

Short Read Aligner/Mapper from MPG

Anfo is a mapper in the spirit of Soap/Maq/Bowtie, but its implementation takes more after BLAST/BLAT. It's most useful for the alignment of sequencing reads where the DNA sequence is somehow modified (think ancient DNA or bisulphite treatment) and/or there is more divergence between sample and reference than what fast mappers will handle gracefully (say the reference genome is missing and a related species is used instead).

Other Packages Related to anfo

• dep: libanfo0 (>= 0.98)

  Library for Short Read Aligner/Mapper from MPG

• dep: libbz2-1.0 [sparc64]

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• dep: libc6 (>= 2.27) [riscv64]

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  dep: libc6 (>= 2.29) [not alpha, ia64, riscv64, sh4]

  dep: libc6 (>= 2.32) [sh4]

• dep: libc6.1 (>= 2.29) [alpha]

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  dep: libc6.1 (>= 2.32) [ia64]

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• dep: libgcc-s1 (>= 3.0) [amd64, arm64, mips64el, ppc64, ppc64el, s390x, x32]

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  dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sh4, sparc64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [i386, ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

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• dep: libgcc-s4 (>= 4.1.1) [hppa]

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Download anfo

Download for all available architectures

Architecture	Package Size	Installed Size	Files
alpha (unofficial port)	113.7 kB	446.0 kB	[list of files]
amd64	113.9 kB	439.0 kB	[list of files]
arm64	105.0 kB	395.0 kB	[list of files]
armel	100.0 kB	345.0 kB	[list of files]
armhf	101.9 kB	305.0 kB	[list of files]
hppa (unofficial port)	115.0 kB	387.0 kB	[list of files]
i386	119.5 kB	413.0 kB	[list of files]
ia64 (unofficial port)	135.6 kB	620.0 kB	[list of files]
m68k (unofficial port)	113.7 kB	405.0 kB	[list of files]
mips64el	109.6 kB	438.0 kB	[list of files]
ppc64 (unofficial port)	115.0 kB	619.0 kB	[list of files]
ppc64el	114.9 kB	619.0 kB	[list of files]
riscv64 (unofficial port)	109.9 kB	361.0 kB	[list of files]
s390x	104.1 kB	411.0 kB	[list of files]
sh4 (unofficial port)	125.5 kB	383.0 kB	[list of files]
sparc64 (unofficial port)	100.0 kB	418.0 kB	[list of files]
x32 (unofficial port)	113.9 kB	389.0 kB	[list of files]