Package: flye (2.9.6+dfsg-2 and others)

[ Source: flye  ]

de novo assembler for single molecule sequencing reads using repeat graphs

Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The package represents a complete pipeline: it takes raw PacBio / ONT reads as input and outputs polished contigs. Flye also has a special mode for metagenome assembly.

Other Packages Related to flye

• dep: libc6 (>= 2.38)

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0) [not riscv64]

  GCC támogató programkönyvtár

  dep: libgcc-s1 (>= 3.4) [riscv64]

• dep: libstdc++6 (>= 14)

  GNU Standard C++ Library v3

• dep: minimap2

  versatile pairwise aligner for genomic and spliced nucleotide sequences

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• dep: zlib1g (>= 1:1.1.4)

  tömörítő könyvtár - futásidejű

Download flye

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Architecture	Version	Package Size	Installed Size	Files
amd64	2.9.6+dfsg-2	22,652.5 kB	36,901.0 kB	[list of files]
arm64	2.9.6+dfsg-2+b1	22,573.4 kB	36,733.0 kB	[list of files]
ppc64el	2.9.6+dfsg-2	22,642.8 kB	37,116.0 kB	[list of files]
riscv64	2.9.6+dfsg-2	22,623.4 kB	36,448.0 kB	[list of files]
s390x	2.9.6+dfsg-2	22,663.5 kB	37,008.0 kB	[list of files]