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[ Source: theseus  ]

Package: theseus (3.3.0-8)

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superimpose macromolecules using maximum likelihood

Theseus is a program that simultaneously superimposes multiple macromolecular structures. Theseus finds the optimal solution to the superposition problem using the method of maximum likelihood. By down-weighting variable regions of the superposition and by correcting for correlations among atoms, the ML superposition method produces very accurate structural alignments.

When macromolecules with different residue sequences are superimposed, other programs and algorithms discard residues that are aligned with gaps. Theseus, however, uses a novel superimposition algorithm that includes all of the data.

Tags: Biology: Proteins, Field: Biology, field::biology:bioinformatics, field::biology:structural, Implemented in: C, User Interface: interface::commandline, role::program, Purpose: Analysing, use::comparing, works-with-format::plaintext

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Download for all available architectures
Architecture Package Size Installed Size Files
amd64 384.0 kB1,003.0 kB [list of files]
arm64 340.2 kB807.0 kB [list of files]
armel 281.1 kB817.0 kB [list of files]
armhf 272.3 kB582.0 kB [list of files]
i386 284.2 kB825.0 kB [list of files]
mips 325.9 kB859.0 kB [list of files]
mips64el 324.4 kB838.0 kB [list of files]
mipsel 337.6 kB879.0 kB [list of files]
ppc64el 419.5 kB1,003.0 kB [list of files]
s390x 281.5 kB831.0 kB [list of files]