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[ Source: ampliconnoise  ]

Package: ampliconnoise (1.29-7 and others)

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removal of noise from 454 sequenced PCR amplicons

AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:

Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences

Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.

Tags: Role: Program

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Download ampliconnoise

Download for all available architectures
Architecture Version Package Size Installed Size Files
amd64 1.29-7+b1 471.6 kB1,384.0 kB [list of files]
arm64 1.29-7+b1 452.3 kB1,339.0 kB [list of files]
armel 1.29-7+b1 446.8 kB1,335.0 kB [list of files]
armhf 1.29-7+b1 442.4 kB1,199.0 kB [list of files]
i386 1.29-7+b1 463.0 kB1,347.0 kB [list of files]
mips 1.29-7+b1 450.4 kB1,365.0 kB [list of files]
mips64el 1.29-7+b1 456.5 kB1,414.0 kB [list of files]
mipsel 1.29-7+b1 453.3 kB1,365.0 kB [list of files]
ppc64el 1.29-7+b1 467.3 kB1,966.0 kB [list of files]
s390x 1.29-7+b1 456.6 kB1,402.0 kB [list of files]