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[ Source: ampliconnoise  ]

Package: ampliconnoise (1.29-7)

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removal of noise from 454 sequenced PCR amplicons

AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:

Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences

Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.

Tags: Role: Program

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Architecture Package Size Installed Size Files
amd64 471.1 kB1,383.0 kB [list of files]
arm64 450.5 kB1,338.0 kB [list of files]
armel 446.5 kB1,342.0 kB [list of files]
armhf 442.0 kB1,198.0 kB [list of files]
i386 462.8 kB1,346.0 kB [list of files]
mips 450.2 kB1,364.0 kB [list of files]
mips64el 456.0 kB1,413.0 kB [list of files]
mipsel 453.1 kB1,364.0 kB [list of files]
ppc64el 467.2 kB1,965.0 kB [list of files]
s390x 456.0 kB1,417.0 kB [list of files]