Package: bppsuite (2.4.1-3)

[ Source: bppsuite  ]

Bio++ program suite

The Bio++ Program Suite is a package of programs using the Bio++ libraries and dedicated to Phylogenetics and Molecular Evolution. All programs are independent, but can be combined to perform rather complex analyses. These programs use the interface helper tools of the libraries, and hence share the same syntax. They also have several options in common, which may also be shared by third-party software.

The following programs are included:

 - BppML for maximum likelihood analysis,
 - BppSeqGen for sequences simulation,
 - BppAncestor for ancestral states reconstruction,
 - BppDist for distance methods,
 - BppPars for parsimony analysis,
 - BppSeqMan for file conversion and sequence manipulation,
 - BppConsense for building consensus tree and computing
   bootstrap values,
 - BppReRoot for tree rerooting.
 - BppTreeDraw for tree drawing.
 - BppAlnScore for comparing alignments and computing alignment scores.
 - BppMixedLikelihoods for computing site per site likelihoods of
   components of mixture models.
 - BppPopGen for population genetics analyses.

Other Packages Related to bppsuite

• dep: libbpp-core4 (>= 2.4.1)

  Bio++ Core library

• dep: libbpp-phyl12 (>= 2.4.1)

  Bio++ Phylogenetic library

• dep: libbpp-popgen8 (>= 2.4.1)

  Bio++ Population Genetics library

• dep: libbpp-seq12 (>= 2.4.1)

  Bio++ Sequence library

• dep: libc6 (>= 2.29)

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0) [not armel, armhf]

  GCC támogató programkönyvtár

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 10.2.0-7) [armel]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 9) [not armel]

• sug: bppsuite-examples

  Examples for Bio++ program suite

Download bppsuite

Download for all available architectures

Architecture	Package Size	Installed Size	Files
amd64	375.9 kB	1,994.0 kB	[list of files]
arm64	345.7 kB	1,922.0 kB	[list of files]
armel	312.1 kB	1,550.0 kB	[list of files]
armhf	321.7 kB	1,278.0 kB	[list of files]
i386	378.9 kB	1,862.0 kB	[list of files]
mips64el	340.8 kB	2,226.0 kB	[list of files]
mipsel	340.7 kB	2,026.0 kB	[list of files]
ppc64el	371.8 kB	2,614.0 kB	[list of files]
s390x	338.6 kB	2,018.0 kB	[list of files]