Package: python3-unifrac (1.2-3 and others)

[ Source: unifrac  ]

high-performance phylogenetic diversity calculations

The de facto repository for high-performance phylogenetic diversity calculations. The methods in this repository are based on an implementation of the Strided State UniFrac algorithm which is faster, and uses less memory than Fast UniFrac. Strided State UniFrac supports Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance Adjusted UniFrac and meta UniFrac. This repository also includes Stacked Faith (manuscript in preparation), a method for calculating Faith's PD that is faster and uses less memory than the Fast UniFrac-based reference implementation.

This package contains the Python3 module.

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  dep: libc6 (>= 2.17) [arm64, ppc64el]

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Download python3-unifrac

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Architecture	Version	Package Size	Installed Size	Files
amd64	1.2-3+b1	118.7 kB	619.0 kB	[list of files]
arm64	1.2-3+b1	109.2 kB	606.0 kB	[list of files]
mips64el	1.2-3+b1	106.4 kB	676.0 kB	[list of files]
ppc64el	1.2-3+b1	120.5 kB	670.0 kB	[list of files]