Paquet : libjellyfish-2.0-dev (2.3.1-3 et autres)

[ Paquet source : jellyfish  ]

count k-mers in DNA sequences (development files of jellyfish)

JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.

JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.

This package contains the development files (static library and header files)

Étiquettes: Développement de logiciel: Bibliothèques, Rôle: Bibliothèque de programmation

Autres paquets associés à libjellyfish-2.0-dev

• dep: libjellyfish-2.0-2 (= 2.3.0-12) [ia64]

  count k-mers in DNA sequences (dynamic library of jellyfish)

  dep: libjellyfish-2.0-2 (= 2.3.1-2+b1) [hppa]

  dep: libjellyfish-2.0-2 (= 2.3.1-3+b3) [amd64, arm64]

  dep: libjellyfish-2.0-2 (= 2.3.1-3+b4) [mips64el, ppc64el, riscv64]

Télécharger libjellyfish-2.0-dev

Télécharger pour toutes les architectures proposées

Architecture	Version	Taille du paquet	Espace occupé une fois installé	Fichiers
amd64	2.3.1-3+b3	134,8 ko	691,0 ko	[liste des fichiers]
arm64	2.3.1-3+b3	132,8 ko	694,0 ko	[liste des fichiers]
hppa (portage non officiel)	2.3.1-2+b1	134,3 ko	627,0 ko	[liste des fichiers]
ia64 (portage non officiel)	2.3.0-12	150,5 ko	825,0 ko	[liste des fichiers]
mips64el	2.3.1-3+b4	140,4 ko	777,0 ko	[liste des fichiers]
ppc64el	2.3.1-3+b4	140,9 ko	725,0 ko	[liste des fichiers]
riscv64	2.3.1-3+b4	265,7 ko	2 255,0 ko	[liste des fichiers]