Paketti: seqprep (1.3.2-9)

[ Source: seqprep  ]

stripping adaptors and/or merging paired reads of DNA sequences with overlap

SeqPrep is a program to merge paired end Illumina reads that are overlapping into a single longer read. It may also just be used for its adapter trimming feature without doing any paired end overlap. When an adapter sequence is present, that means that the two reads must overlap (in most cases) so they are forcefully merged. When reads do not have adapter sequence they must be treated with care when doing the merging, so a much more specific approach is taken. The default parameters were chosen with specificity in mind, so that they could be ran on libraries where very few reads are expected to overlap. It is always safest though to save the overlapping procedure for libraries where you have some prior knowledge that a significant portion of the reads will have some overlap.

Muut pakettiin seqprep liittyvät paketit

• dep: libc6 (>= 2.34)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: zlib1g (>= 1:1.1.4) [ei armel, armhf]

  pakkauskirjaston ajonaikaistiedostot

  dep: zlib1g (>= 1:1.2.3.3) [armel, armhf]

Imuroi seqprep

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	27.5 kt	99.0 kt	[tiedostoluettelo]
arm64	26.2 kt	103.0 kt	[tiedostoluettelo]
armel	28.0 kt	110.0 kt	[tiedostoluettelo]
armhf	26.6 kt	82.0 kt	[tiedostoluettelo]
i386	27.3 kt	90.0 kt	[tiedostoluettelo]
mips64el	26.7 kt	169.0 kt	[tiedostoluettelo]
ppc64el	26.4 kt	103.0 kt	[tiedostoluettelo]
s390x	26.6 kt	103.0 kt	[tiedostoluettelo]