Paketti: r-bioc-pfamanalyzer (1.2.0+dfsg-1)

[ Source: r-bioc-pfamanalyzer  ]

GNU R identification of domain isotypes in pfam data

Protein domains is one of the most import annoation of proteins that are with the Pfam database/tool being (by far) the most used tool. This R package enables the user to read the pfam prediction from both webserver and stand-alone runs into R. It was recently shown most human protein domains exist as multiple distinct variants termed domain isotypes. Different domain isotypes are used in a cell, tissue, and disease- specific manner. Accordingly, it was found that domain isotypes, compared to each other, modulate, or abolish the functionality of a protein domain. This R package enables the identification and classification of such domain isotypes from Pfam data.

Muut pakettiin r-bioc-pfamanalyzer liittyvät paketit

• dep: r-api-4.0

  näennäispaketti, jonka toteuttaa r-base-core

• dep: r-api-bioc-3.18

  näennäispaketti, jonka toteuttaa r-bioc-biocgenerics

• dep: r-cran-dplyr

  GNU R grammar of data manipulation

• dep: r-cran-magrittr

  GNU R forward-pipe operator

• dep: r-cran-readr

  GNU R package to read rectangular text data

• dep: r-cran-stringr

  Make it easier to work with strings

• dep: r-cran-tibble

  GNU R Simple Data Frames

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

Imuroi r-bioc-pfamanalyzer

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