Paketti: flye (2.9.3+dfsg2-1)

[ Source: flye  ]

de novo assembler for single molecule sequencing reads using repeat graphs

Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The package represents a complete pipeline: it takes raw PacBio / ONT reads as input and outputs polished contigs. Flye also has a special mode for metagenome assembly.

Muut pakettiin flye liittyvät paketit

• dep: libc6 (>= 2.34)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: libgcc-s1 (>= 3.4)

  GCC:n apukirjasto

• dep: libstdc++6 (>= 13.1)

  GNU standardi C++ -kirjasto, versio 3

• dep: minimap2

  versatile pairwise aligner for genomic and spliced nucleotide sequences

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-six

  Python 2 and 3 compatibility library

• dep: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• dep: zlib1g (>= 1:1.1.4)

  pakkauskirjaston ajonaikaistiedostot

Imuroi flye

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
riscv64	22,615.6 kt	36,508.0 kt	[tiedostoluettelo]