Paketti: unifrac-tools (1.4-3 ja muut)

[ Source: unifrac-tools  ]

high-performance phylogenetic diversity calculations (binaries)

The de facto repository for high-performance phylogenetic diversity calculations. The methods in this repository are based on an implementation of the Strided State UniFrac algorithm which is faster, and uses less memory than Fast UniFrac. Strided State UniFrac supports Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance Adjusted UniFrac and meta UniFrac. This repository also includes Stacked Faith (manuscript in preparation), a method for calculating Faith's PD that is faster and uses less memory than the Fast UniFrac-based reference implementation.

This package contains target binaries ssu and faithpd

Muut pakettiin unifrac-tools liittyvät paketit

• dep: libblas3

  Basic Linear Algebra Reference implementations, shared library

  tai libblas.so.3

  näennäispaketti, jonka toteuttaa libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libc6 (>= 2.34)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC:n apukirjasto

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: liblapacke (>= 3.12.0)

  Library of linear algebra routines 3 - C lib shared version

• dep: liblz4-1 (>= 0.0~r130)

  Fast LZ compression algorithm library - runtime

• dep: libssu0

  high-performance phylogenetic diversity calculations (lib)

• dep: libstdc++6 (>= 13.1)

  GNU standardi C++ -kirjasto, versio 3

• dep: libsz2 (>= 1.1.3)

  Adaptive Entropy Coding library - SZIP

• dep: zlib1g (>= 1:1.1.4)

  pakkauskirjaston ajonaikaistiedostot

Imuroi unifrac-tools

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
amd64	1.4-3+b2	1,630.4 kt	7,938.0 kt	[tiedostoluettelo]