Paketti: amap-align (2.2+git20080214.600fc29+dfsg-1)

[ Source: amap-align  ]

Protein multiple alignment by sequence annealing

AMAP is a command line tool to perform multiple alignment of peptidic sequences. It utilizes posterior decoding, and a sequence-annealing alignment, instead of the traditional progressive alignment method. It is the only alignment program that allows one to control the sensitivity / specificity tradeoff. It is based on the ProbCons source code, but uses alignment metric accuracy and eliminates the consistency transformation.

The Java visualisation tool of AMAP 2.2 is not yet packaged in Debian.

Tagit: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, use::comparing, Supports Format: Plain Text, Works with: Need an extra tag

Muut pakettiin amap-align liittyvät paketit

• dep: libc6 (>= 2.27)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: libgcc1 (>= 1:3.0) [ei armhf]

  GCC:n apukirjasto

  dep: libgcc1 (>= 1:3.5) [armhf]

• dep: libstdc++6 (>= 5.2)

  GNU standardi C++ -kirjasto, versio 3

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Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	128.3 kt	281.0 kt	[tiedostoluettelo]
arm64	126.2 kt	257.0 kt	[tiedostoluettelo]
armhf	101.4 kt	181.0 kt	[tiedostoluettelo]
i386	108.9 kt	245.0 kt	[tiedostoluettelo]