Tarkennettu haku
buster  ] [  sid  ]
[ Source: libseqlib  ]

Paketti: libseqlib0 (1.1.1+dfsg-5)

Links for libseqlib0



Imuroi lähdekoodipaketti libseqlib:


External Resources:

Samankaltaisia paketteja:

C++ htslib/bwa-mem/fermi interface for interrogating sequence data

C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.

Muut pakettiin libseqlib0 liittyvät paketit

  • depends
  • recommends
  • suggests
  • enhances

Imuroi libseqlib0

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri Paketin koko Koko asennettuna Tiedostot
amd64 112.7 kt346.0 kt [tiedostoluettelo]