Package: spoa (4.0.7+ds-1 and others)

[ Source: spoa  ]

SIMD partial order alignment tool

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

Other Packages Related to spoa

• dep: libc6 (>= 2.14) [amd64]

  Biblioteca de C de GNU: Bibliotecas compartidas
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.4) [armhf, i386]

• dep: libgcc-s1 (>= 3.0) [not armhf]

  Biblioteca de ayuda de GCC

  dep: libgcc-s1 (>= 3.5) [armhf]

• dep: libspoa7.0.0 (>= 4.0.5+ds) [amd64]

  SIMD partial order alignment library

  dep: libspoa7.0.0 (>= 4.0.7+ds) [not amd64]

• dep: libstdc++6 (>= 5.2)

  biblioteca estándar de C++ de GNU v3

• dep: zlib1g (>= 1:1.1.4)

  Biblioteca de compresión, ejecutables

Download spoa

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
amd64	4.0.7+ds-1+b1	37.1 kB	79.0 kB	[list of files]
arm64	4.0.7+ds-1+b1	35.9 kB	75.0 kB	[list of files]
armhf	4.0.7+ds-1+b1	34.4 kB	62.0 kB	[list of files]
i386	4.0.7+ds-1+b1	37.8 kB	78.0 kB	[list of files]