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[ Source: fermi-lite  ]

Package: fml-asm (0.1-2 and others)

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tool for assembling Illumina short reads in small regions

Fml-asm is a command-line tool for assembling Illumina short reads in regions from 100bp to 10 million bp in size, based on the fermi-lite library. It is largely a light-weight in-memory version of fermikit without generating any intermediate files. It inherits the performance, the relatively small memory footprint and the features of fermikit. In particular, fermi-lite is able to retain heterozygous events and thus can be used to assemble diploid regions for the purpose of variant calling.

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Download fml-asm

Download for all available architectures
Architecture Version Package Size Installed Size Files
amd64 0.1-2+b1 65.3 kB151.0 kB [list of files]