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[ Source: anfo  ]

Package: anfo (0.98-5)

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Short Read Aligner/Mapper from MPG

Anfo is a mapper in the spirit of Soap/Maq/Bowtie, but its implementation takes more after BLAST/BLAT. It's most useful for the alignment of sequencing reads where the DNA sequence is somehow modified (think ancient DNA or bisulphite treatment) and/or there is more divergence between sample and reference than what fast mappers will handle gracefully (say the reference genome is missing and a related species is used instead).

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Download anfo

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 113.7 kB406.0 kB [list of files]
arm64 106.2 kB402.0 kB [list of files]
armel 101.9 kB352.0 kB [list of files]
armhf 105.7 kB312.0 kB [list of files]
i386 119.9 kB404.0 kB [list of files]
mips 110.3 kB421.0 kB [list of files]
mips64el 110.8 kB460.0 kB [list of files]
mipsel 112.2 kB421.0 kB [list of files]
ppc64el 110.8 kB618.0 kB [list of files]
s390x 109.5 kB442.0 kB [list of files]