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[ Source: libsmithwaterman  ]

Package: smithwaterman (0.0+git20160702.2610e25-7)

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determine similar regions between two strings or genomic sequences

The Smith–Waterman algorithm performs local sequence alignment; that is, for determining similar regions between two strings or nucleotide or protein sequences. Instead of looking at the total sequence, the Smith–Waterman algorithm compares segments of all possible lengths and optimizes the similarity measure.

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Download smithwaterman

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 10.0 kB37.0 kB [list of files]
amd64 9.8 kB33.0 kB [list of files]
arm64 9.4 kB33.0 kB [list of files]
armel 8.9 kB28.0 kB [list of files]
armhf 8.8 kB24.0 kB [list of files]
hppa (unofficial port) 10.1 kB29.0 kB [list of files]
i386 10.2 kB36.0 kB [list of files]
mips 10.0 kB33.0 kB [list of files]
mips64el 10.1 kB34.0 kB [list of files]
mipsel 10.0 kB33.0 kB [list of files]
powerpcspe (unofficial port) 9.9 kB76.0 kB [list of files]
ppc64 (unofficial port) 10.3 kB77.0 kB [list of files]
ppc64el 10.1 kB77.0 kB [list of files]
riscv64 (unofficial port) 10.0 kB29.0 kB [list of files]
s390x 9.4 kB33.0 kB [list of files]
sh4 (unofficial port) 10.4 kB28.0 kB [list of files]
sparc64 (unofficial port) 9.2 kB38.0 kB [list of files]
x32 (unofficial port) 9.7 kB32.0 kB [list of files]