[ Source: gmap ]
Package: gmap (2024-02-22+ds-1)
Links for gmap
Debian Resources:
Download Source Package gmap:
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Shaun Jackman (QA Page)
- Andreas Tille (QA Page)
- Alexandre Mestiashvili (QA Page)
- Étienne Mollier (QA Page)
External Resources:
- Homepage [research-pub.gene.com]
Similar packages:
spliced and SNP-tolerant alignment for mRNA and short reads
This package contains the programs GMAP and GSNAP as well as utilities to manage genome databases in GMAP/GSNAP format. GMAP (Genomic Mapping and Alignment Program) is a tool for aligning EST, mRNA and cDNA sequences. GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for aligning single-end and paired-end transcriptome reads. Both tools can use a database of
* known splice sites and identify novel splice sites. * known single-nucleotide polymorphisms (SNPs).GSNAP can align bisulfite-treated DNA.
Other Packages Related to gmap
|
|
|
|
-
- dep: libbz2-1.0
- high-quality block-sorting file compressor library - runtime
-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
-
- dep: perl
- Larry Wall's Practical Extraction and Report Language
-
- dep: zlib1g (>= 1:1.2.6)
- compression library - runtime
Download gmap
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 32,181.7 kB | 253,542.0 kB | [list of files] |
| arm64 | 6,178.4 kB | 58,874.0 kB | [list of files] |
| armel | 4,799.7 kB | 44,079.0 kB | [list of files] |
| armhf | 5,380.9 kB | 41,951.0 kB | [list of files] |
| i386 | 5,503.9 kB | 44,267.0 kB | [list of files] |
| mips64el | 5,010.0 kB | 55,483.0 kB | [list of files] |
| ppc64el | 6,434.1 kB | 61,434.0 kB | [list of files] |
| riscv64 | 6,112.4 kB | 57,230.0 kB | [list of files] |