Package: python3-mappy (2.27+dfsg-1 and others)

[ Source: minimap2  ]

Python3 interface minimap2

Minimap2 is a versatile sequence alignment program that aligns DNA or mRNA sequences against a large reference database. Typical use cases include: (1) mapping PacBio or Oxford Nanopore genomic reads to the human genome; (2) finding overlaps between long reads with error rate up to ~15%; (3) splice-aware alignment of PacBio Iso-Seq or Nanopore cDNA or Direct RNA reads against a reference genome; (4) aligning Illumina single- or paired-end reads; (5) assembly-to-assembly alignment; (6) full- genome alignment between two closely related species with divergence below ~15%.

This package contains the Python3 interface for using minimap2.

Other Packages Related to python3-mappy

• dep: libc6 (>= 2.34) [m68k, x32]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.38) [not alpha, ia64, loong64, m68k, sh4, x32]

  dep: libc6 (>= 2.40) [sh4]

  dep: libc6 (>= 2.41) [loong64]

• dep: libc6.1 (>= 2.37) [ia64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.38) [alpha]

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.13) [ia64]

  dep: python3 (<< 3.14) [m68k, sh4, x32]

  dep: python3 (<< 3.15) [not ia64, m68k, sh4, x32]

  dep: python3 (>= 3.11~) [ia64]

  dep: python3 (>= 3.12~) [m68k, x32]

  dep: python3 (>= 3.13~) [not ia64, m68k, x32]

• dep: zlib1g (>= 1:1.2.3.3)

  compression library - runtime

Download python3-mappy

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	2.27+dfsg-1+b3	198.4 kB	958.0 kB	[list of files]
amd64	2.27+dfsg-1+b4	171.8 kB	694.0 kB	[list of files]
arm64	2.27+dfsg-1+b5	169.3 kB	826.0 kB	[list of files]
armhf	2.27+dfsg-1+b4	178.4 kB	562.0 kB	[list of files]
hppa (unofficial port)	2.27+dfsg-1+b4	201.1 kB	886.0 kB	[list of files]
i386	2.27+dfsg-1+b4	206.5 kB	982.0 kB	[list of files]
ia64 (unofficial port)	2.24+dfsg-3+b1	256.8 kB	1,500.0 kB	[list of files]
loong64 (unofficial port)	2.27+dfsg-1+b4	181.7 kB	826.0 kB	[list of files]
m68k (unofficial port)	2.27+dfsg-1+b2	167.8 kB	784.0 kB	[list of files]
ppc64 (unofficial port)	2.27+dfsg-1+b4	205.7 kB	1,082.0 kB	[list of files]
ppc64el	2.27+dfsg-1+b4	196.1 kB	954.0 kB	[list of files]
riscv64	2.27+dfsg-1+b4	205.7 kB	666.0 kB	[list of files]
s390x	2.27+dfsg-1+b4	217.8 kB	954.0 kB	[list of files]
sh4 (unofficial port)	2.27+dfsg-1+b2	206.1 kB	428.0 kB	[list of files]
sparc64 (unofficial port)	2.27+dfsg-1+b4	174.8 kB	2,116.0 kB	[list of files]
x32 (unofficial port)	2.27+dfsg-1+b1	177.9 kB	738.0 kB	[list of files]