[ Source: unikmer ]
Package: unikmer (0.19.1-1 and others)
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- Homepage [github.com]
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Toolkit for nucleic acid k-mer analysis
unikmer is a golang package and a toolkit for nucleic acid k-mer analysis, providing functions including set operation k-mers optional with TaxIDs but without count information.
K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64, and serialized in binary file with extension .unik.
TaxIDs can be assigned when counting k-mers from genome sequences, and LCA (Lowest Common Ancestor) is computed during set opertions including computing union, intersecton, set difference, unique and repeated k-mers.
Other Packages Related to unikmer
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
Download unikmer
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| i386 | 0.19.1-1+b6 | 2,373.0 kB | 7,760.0 kB | [list of files] |