Package: r-bioc-singler (2.4.1+ds-1 and others)

[ Source: r-bioc-singler  ]

BioConductor reference-based single-cell RNA-Seq annotation

Performs unbiased cell type recognition from single-cell RNA sequencing data, by leveraging reference transcriptomic datasets of pure cell types to infer the cell of origin of each single cell independently.

Other Packages Related to r-bioc-singler

• dep: libc6 (>= 2.32) [not alpha, ia64, sh4]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.32) [alpha]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [amd64, arm64, mips64el, ppc64, ppc64el, s390x, x32]

  GCC support library

  dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sparc64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [i386, ia64, sh4]

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support library

• dep: libstdc++6 (>= 12) [x32]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 13.1) [not x32]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: r-api-4.0

  virtual package provided by r-base-core

• dep: r-api-bioc-3.16 [x32]

  Package not available

• dep: r-api-bioc-3.18 [not x32]

  virtual package provided by r-bioc-biocgenerics

• dep: r-base-core (>= 4.2.2.20221110-1) [x32]

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• dep: r-bioc-beachmat

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• dep: r-bioc-biocneighbors

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• dep: r-bioc-biocparallel

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• dep: r-bioc-biocsingular

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• dep: r-bioc-delayedarray

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• dep: r-bioc-delayedmatrixstats

  Functions on Rows and Columns of 'DelayedMatrix' Objects

• dep: r-bioc-s4vectors

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• dep: r-bioc-summarizedexperiment

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• dep: r-cran-matrix

  GNU R package of classes for dense and sparse matrices

• dep: r-cran-rcpp

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• rec: r-bioc-ensembldb

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• rec: r-bioc-scater

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• rec: r-bioc-scran

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• rec: r-bioc-singlecellexperiment

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• rec: r-cran-pheatmap

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• sug: r-bioc-biocgenerics

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• sug: r-bioc-biocstyle

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• sug: r-bioc-scran [not x32]

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• sug: r-bioc-singlecellexperiment [not x32]

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Download r-bioc-singler

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	2.4.1+ds-1	319.6 kB	836.0 kB	[list of files]
amd64	2.4.1+ds-1	326.9 kB	795.0 kB	[list of files]
arm64	2.4.1+ds-1	311.7 kB	771.0 kB	[list of files]
armel	2.4.1+ds-1	309.2 kB	742.0 kB	[list of files]
armhf	2.4.1+ds-1	309.4 kB	654.0 kB	[list of files]
hppa (unofficial port)	2.4.1+ds-1	327.6 kB	824.0 kB	[list of files]
i386	2.4.1+ds-1	334.9 kB	801.0 kB	[list of files]
ia64 (unofficial port)	2.4.1+ds-1	353.7 kB	1,147.0 kB	[list of files]
mips64el	2.4.1+ds-1	310.4 kB	861.0 kB	[list of files]
ppc64 (unofficial port)	2.4.1+ds-1	334.0 kB	968.0 kB	[list of files]
ppc64el	2.4.1+ds-1	331.7 kB	899.0 kB	[list of files]
riscv64	2.4.1+ds-1	326.1 kB	710.0 kB	[list of files]
s390x	2.4.1+ds-1	333.9 kB	843.0 kB	[list of files]
sh4 (unofficial port)	2.4.1+ds-1	343.3 kB	769.0 kB	[list of files]
sparc64 (unofficial port)	2.4.1+ds-1	304.9 kB	1,419.0 kB	[list of files]
x32 (unofficial port)	2.0.0+ds-1	389.0 kB	1,016.0 kB	[list of files]